Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01152 ATGCCGGTTTCAACGCGGTCTCAGATCAGCGTCAGCAACAACAATGGCGAAAACGAAAACGAAGTGAATCCATCGTCAACAACAGCGACGAGGATGAGAAACCCGCACCATGGCCTGAAGGAGAAGCTGAAAACGCTCACTCTCTTATACGAGCAGCAGAAGCAAGCCTCTGCATCTCTCAAAAACGCGTCTTTCACTTTCAAACCTCCTCCTCCTTCAGAGAAAGCCGTGATGCGAGAGAACACAATGCCAAACAGCACAATCACAAGAACCTTTGTCCTACCCCAACCTCCCTCATCAAACGACAACAACAACGATGAAGACGCAAAGGAAAACGTAATCGTGGGAGCAGATCGAATTGTGGCGTTCTCGTGTCCTAGAAAGACAATGAAAGCAAATAATAATAATGTTTCGGTTTCTCAGTCTGCCACCGTGGCAAGGAAGCTCTCGATGGGGCCGGTGAGAGTGGAAGCGGAGAAGGGAGGGAAAGTTGGGAGCAGCAGGATTATGGTTTTTGTGAGGGTGAGGCCTATGAATAAGAAGGAAAAGGAAGCCGGTTCACGGTGCTGCATCAGCGTCGTTAATCGCCGTGACGTTTATCTCACGGAGTTTGCTAATGAAAACGATTACCTTAGACTCAATAGGCTTCGCGGACGCCACTTTACCTTCGACGCAGCGTTTCCAGATTCTGCTACTCAGCAAGAAGTTTATTCCACCTCGACTTCAGAGCTTGTGGAAGCGGTTTTGCAAGGGAGGAATGGGTCGGTTTTCTGTTACGGGGCGACGGGAGCTGGGAAGACTTACACAATGCTTGGGACGATGGAGAATCCTGGGGTTATGGTTTTGGCGATTAAGGATCTTTTCAGTAAAATCAGGCAGAGGAGTTGTGATGGAAACCATGTGGTTCATTTGTCCTATCTTGAGGTTTATAATGAAACTGTTAGGGATTTGCTTTCGCCAGGAAGGCCTCTCGTTCTTAGAGAGGATAAACAGGGGATTGTGGCGGCCGGTCTAACACAATACAGAGCTTATTCAACGGATGAAGTGATGGCATTGCTTCAACAAGGAAATCAGAACCGAACCACAGAACCAACTCGTGCAAATGAAACATCTTCCCGTTCCCATGCAATTTTGCAGGTTGTGGTAGAATACCGAGTTAGAGATGCTGCAATGAATATTATTAACCGAGTGGGTAAGCTCTCATTAATTGATCTTGCAGGGTCAGAGAGAGCTCTCGCTACGGATCAAAGAACACTTAGATCTCTTGAGGGTGCCAATATAAACCGGTCTCTTCTTGCACTAAGCAGCTGTATTAATTCTCTGGTAGAAGGCAAGAAACACATTCCATACCGAAACTCAAAACTCACTCAACTTCTCAAGGATTCACTAGGAGGAACTTGTAACACTGTCATGATTGCAAACATAAGCCCAAGTAACCTCTCATTTGGTGAAACTCAGAACACAGTTCATTGGGCTGATAGAGCCAAGGAGATTCGGGCAAAGGTAAGTGATGCAAATGAGGATCAATTGCCGGTGCCCGAGATAGAAACTGACCAGGCCAAGCTGGTACTTGAGCTGCAAAAGGAGAATCGTGAATTAAGAATACAACTAGCACAACATCAACAGAAATTGTTGACCCTCCAAGCACAATCCTTAGCTTCCCATTCCTCCCCAACACCACCACCTTCAGCTGGACCTCTTTCCACTCCTCTAACTTCTGCTCAACCAATCGAAAAACGAAGGACTAGATCCTCTTTCTTGGCTGGAACTTGTTTCACTCCAGAAACCAAGCAGAAGGGAGCTGAACTAACCATCAAGACACTTCAACGGACGGTGAAAACACTAGAGGCAGAGATAGAGAAAATGAGGAAGGATCATAGCTTGCAGCTAAAGCAAAAAGATGATCTTATTCGCGAGCTTTCGCAAAAGGGTGGAAAACAGGCATTAGCAACTGGAGAACTGGGGAAGGGAGTGGTGACCAGGTCTAGCATACGGCCAAAGGAACCAAACAATAGTGAGATGAAGAGTCCAAGTCAACGTTTTAGATCACCAGCCCCAACTGCCAAGAAACGAAGCTTTTGGGACATAACCACAACTAATAGTCCATCAGTTACTACAGTAAATGGTAGAAAAACTAGAAGTCATGTCCTTGCTGAACCTGCTGCACCTCCTCCATCCATGCTTCTTCAGCCTGGTTTTGCTCGTCAAAAACCCAATATTTAA 2223 0.4624 MPVSTRSQISVSNNNGENENEVNPSSTTATRMRNPHHGLKEKLKTLTLLYEQQKQASASLKNASFTFKPPPPSEKAVMRENTMPNSTITRTFVLPQPPSSNDNNNDEDAKENVIVGADRIVAFSCPRKTMKANNNNVSVSQSATVARKLSMGPVRVEAEKGGKVGSSRIMVFVRVRPMNKKEKEAGSRCCISVVNRRDVYLTEFANENDYLRLNRLRGRHFTFDAAFPDSATQQEVYSTSTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTMENPGVMVLAIKDLFSKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQQGNQNRTTEPTRANETSSRSHAILQVVVEYRVRDAAMNIINRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINSLVEGKKHIPYRNSKLTQLLKDSLGGTCNTVMIANISPSNLSFGETQNTVHWADRAKEIRAKVSDANEDQLPVPEIETDQAKLVLELQKENRELRIQLAQHQQKLLTLQAQSLASHSSPTPPPSAGPLSTPLTSAQPIEKRRTRSSFLAGTCFTPETKQKGAELTIKTLQRTVKTLEAEIEKMRKDHSLQLKQKDDLIRELSQKGGKQALATGELGKGVVTRSSIRPKEPNNSEMKSPSQRFRSPAPTAKKRSFWDITTTNSPSVTTVNGRKTRSHVLAEPAAPPPSMLLQPGFARQKPNI 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01152 740 Pfam Kinesin motor domain 174 498 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01152 740 Coils Coil 523 550 - -
Gma17g01152 740 MobiDBLite consensus disorder prediction 643 740 - -
Gma17g01152 740 PRINTS Kinesin heavy chain signature 251 272 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01152 740 PRINTS Kinesin heavy chain signature 365 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01152 740 PRINTS Kinesin heavy chain signature 399 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01152 740 PRINTS Kinesin heavy chain signature 448 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01152 740 Coils Coil 598 632 - -
Gma17g01152 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 543 IPR027417 -
Gma17g01152 740 MobiDBLite consensus disorder prediction 1 38 - -
Gma17g01152 740 MobiDBLite consensus disorder prediction 1 33 - -
Gma17g01152 740 MobiDBLite consensus disorder prediction 664 685 - -
Gma17g01152 740 MobiDBLite consensus disorder prediction 692 712 - -
Gma17g01152 740 ProSiteProfiles Kinesin motor domain profile. 168 498 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01152 740 MobiDBLite consensus disorder prediction 568 583 - -
Gma17g01152 740 ProSitePatterns Kinesin motor domain signature. 398 409 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma17g01152 740 PANTHER KINESIN-RELATED 154 733 IPR027640 GO:0003777|GO:0007018
Gma17g01152 740 SMART kinesin_4 166 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma17g01152 740 PANTHER KINESIN-LIKE PROTEIN 154 733 - -
Gma17g01152 740 MobiDBLite consensus disorder prediction 550 583 - -
Gma17g01152 740 Gene3D Kinesin motor domain 161 504 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01152 Gma-Chr17 10025410 10029324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01152 133 545 Miscellaneous Gene Families AT2G21380 35.335 1.13e-59 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01152 K10401 - gmx:100806591 1364.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01152 17 10025410 10029324 Gma17g01152 17 10025410 10029324 ECH
Gma17g01152 17 10025410 10029324 Gma05g00142 05 1397690 1402036 GST