Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01143 ATGGCGGACGCCCACAGAACCACCGCCCCACCACCCTCCCTCTCCGCCGCGTTTCTCCGAAAACTCCAAGACCGGGGACCCAACTCAACCCAGCTCGCCTGCATCTTAACCCTCCTCCTAACTGCCTCCGTCTTGCTCCTCCTCACGGGCCTCACCGTCGCTGGGGCCGTCCTGGGCCTCATATTTTTCCTACCCTTAATCATCGTATCGAGCCCAGTGTGGGTCCCAGCCGGCACCTTTCTATTCATCGTCACCGCAGCTTTCTTGTCCGTGTGCGGTTTCGGCGTTGCACTCGTGGCCGTGCTGTCTTGGATGTACCATTACTTCAGAGGCCTCCACCCGCCCGGTTCGGACCGGGTTGACTACGCTCGGAGTCGCATTTACGACACCGCCAGCCACGTAAAAGACTACGCCAGAGAATACGGTGGCTATTTGCAGAGTAAGGTCAAAGATGCAGCTCCCGGCGCGTGA 471 0.5966 MADAHRTTAPPPSLSAAFLRKLQDRGPNSTQLACILTLLLTASVLLLLTGLTVAGAVLGLIFFLPLIIVSSPVWVPAGTFLFIVTAAFLSVCGFGVALVAVLSWMYHYFRGLHPPGSDRVDYARSRIYDTASHVKDYAREYGGYLQSKVKDAAPGA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01143 156 PANTHER OLEOSIN 12 156 IPR000136 GO:0012511|GO:0016021
Gma17g01143 156 Pfam Oleosin 31 142 IPR000136 GO:0012511|GO:0016021
Gma17g01143 156 PANTHER F27J15.22 12 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01143 Gma-Chr17 9961737 9962550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01143 7 156 Lipid Metabolism Gene Families AT3G18570 54.667 1.38e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01143 - - gmx:100794728 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01143 17 9961737 9962550 Gma17g01143 17 9961737 9962550 ECH
Gma17g01143 17 9961737 9962550 Gma05g00131 05 1340777 1341467 GST