Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01137 ATGTTTATTTTCATGTTTCTGCTACAGGATCCAAGGGCTGTACGGTTTTTTGATCGCCGGGACTATTATACTGCCCATGGTGAGAATGCTACATTCATTGCAAAGACCTATTACCACACTACTACAGCTATGCGACAACTGGGCAGTGGATCAAATGCTCTTTCCAGTGTAAGTGTCAGCAGGAACATGTTTGAAACAATTGCTCGTGATCTCCTTTTGGAGAGAACAGACCATACTCTTGAGCTCTATGAAGGTAGTGGTTCTAATTGGAGACTGGTCAAAAGTGGAACACCTGGTAATATTGGCAGTTTTGAAGATGTTCTGTTTGCTAACAGTGAAATGCAAGATTCTCCAGTTGTTGTTGCTTTGTCACTTAACTATCGGGAAAATGGGTGCACCATTGGGTTAGGATTTGTTGATCTAACTAAGAGAGTACTTGGGATGGCTGAATTCCTTGATGACAGTCACTTCACGAATGTGGAGTCAGCATTTGTTGCACTTGGGTGCAAAGAGTGCATTCTGCCTATAGAGTCTGGCAAATCTACTGAAAATAGAATGTTGTGTGATGTGTTGACTAAATGTGGTGTGATGTTAACTGAGAAAAAGAAATCTGAATTTAAAACTAGGGATCTGGTACAGGATCTTGGCAGGCTTGTTAAAGGTCCTATTGAACCAGTTCGAGATTTAGTGTCTGGATTTGAATTTGCACCTGGTGCTTTAGGGGCATTACTATCTTATGCAGAGTTACTGGCAGATGAAAGCAATTATGAAAATTATACTCTGCGTAGTTACAATCTTGACAGCTACATGAGGTTAGACTCTGCAGCCATGAGAGCACTTAATGTCCTGGAAAGCAAAACTGATGCAAACAAAAATTTCAGTTTGTTTGGTCTCATGAATAGGACTTGTACTGCTGGAATGGGAAAACGGTTATTGCACGTCTGGCTAAAACAACCATTAGTAGATGTAAAAGAAATTAATTCCAGGTTGGACATAGTTCAAGCATTTGTAGAGGACACTGCTCTTCGCCAAGATCTGAGGCAGCATCTGAAAAGAATATCAGACATTGAGCGATTGATGCACAATATTCAGAAGCGACGAGCTGGTCTGCAACATATTGTTAAACTTTATCAGTCAAGTATTAGACTACCTTACATCAAAAGTGCTTTGGAAAGATATGATGGACAATTTTCCACAATGATGAGGAGTAGGTATCTGGAACCTATTGAGTTATGGACTGATGATGAGCACCTGAACAAATTCATTGGGCTTGTAGAAGCTTCTGTTGACCTTGATCAACTGGAGAATAGGGAATACATGATTTCTCCAAGCTATGACTCTATACTAGCTAACCTAAAGGACCAACAAGAATTACTAGAGAGCCAAATACAAAACTTGCATAGACAAACTGCTGATGATCTTGATCTGCCTATGGACAAGGCATTAAAGTTAGACAAGGGCACACAATTTGGACATGTTTTCAGAATCACAAAGAAGGAAGAGCCAAAAATAAGGAAGAAGCTCAATACTCAGTTTATTATACTGGAAACCCGTAAAGATGGAGTGAAATTTACCAACACGAAGCTCAAGAAACTAGGGGACCAATATCAACAAATTCTTGAGGAGTATAAAAGTTGTCAAAAAAAGTTAGTTGATAGAGTAGTTCAAACTGCGGCAACTTTCTCTGAGGTGTTTGAATCTTTAGCTGAAATAATTTCTGAATTGGATGTATTACTGAGCTTTGCTGATTTGGCTTCTAGTTGTCCTACTCCCTACACAAGGCCTGACATCACTTCATCGGACGAAGGAGATATTACTTTAGAAGGATGCAGACACCCTTGTGTAGAGGCACAAGACTGGGTGAATTTTATACCAAATGATTGTAAGCTTGTCAGAGGAAAAACTTGGTTTCAAATAATAACAGGACCTAACATGGGTGGGAAATCAACATTTATCCGACAGGTGGGTGTTAATATTTTGATGGCACAAGTTGGTTCCTTTGTTCCTTGTGACAATGCCAGCATATCTGTCCGTGATTGCATTTTTGCCCGTGTTGGTGCTGGTGACTGTCAACTTCGTGGAGTTTCTACCTTTATGCAAGAAATGCTTGAAACTGCATCAATATTAAAGGGAGCTACTGACAAGTCCTTGATAATCATTGATGAGTTGGGACGTGGGACATCAACTTATGATGGATTTGGTTTAGCTTGGGCCATTTGTGAGCATATTGTTGAAGTAATCAAAGCACCTACTTTGTTTGCCACCCACTTTCACGAATTGACTGCATTAGCCCTTGAAAATGTAAGCAATGATTCACAGAAGCAAATTGTTGGTGTGGCAAACTATCATGTTAGTGCACATATTGACTCATCAACTCGAAAGCTAACCATGCTATACAAGGTTGAACCTGGAGCTTGTGATCAGAGTTTCGGTATTCATGTTGCCGAGTTTGCAAACTTCCCTGAAAGTGTTGTTACCCTAGCTAGAGAAAAGGCAGCAGAATTAGAAGACTTTTCTCCTTCTGCAACATCCTTAAATCATACTACACAGGAGGTAGGTTCTAAACGTAAGAGAGCATTTGAACCCGATGACATGTCTCAAGGGGCTGCAAAGGCTCGCCAATTTCTAGAAGCATTTGTTGCTTTGCCTCTAGAAACCATGGACAAAATGCAAGCTTTGCAAGAAGTAAAGAAGTTAACAGATACTTTGGAGAAGGATGCAGAAAACTGTAATTGGCTGCAACAGTTCTTGTAG 2754 0.4016 MFIFMFLLQDPRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAMRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNIGSFEDVLFANSEMQDSPVVVALSLNYRENGCTIGLGFVDLTKRVLGMAEFLDDSHFTNVESAFVALGCKECILPIESGKSTENRMLCDVLTKCGVMLTEKKKSEFKTRDLVQDLGRLVKGPIEPVRDLVSGFEFAPGALGALLSYAELLADESNYENYTLRSYNLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHVWLKQPLVDVKEINSRLDIVQAFVEDTALRQDLRQHLKRISDIERLMHNIQKRRAGLQHIVKLYQSSIRLPYIKSALERYDGQFSTMMRSRYLEPIELWTDDEHLNKFIGLVEASVDLDQLENREYMISPSYDSILANLKDQQELLESQIQNLHRQTADDLDLPMDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIILETRKDGVKFTNTKLKKLGDQYQQILEEYKSCQKKLVDRVVQTAATFSEVFESLAEIISELDVLLSFADLASSCPTPYTRPDITSSDEGDITLEGCRHPCVEAQDWVNFIPNDCKLVRGKTWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDNASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALALENVSNDSQKQIVGVANYHVSAHIDSSTRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPSATSLNHTTQEVGSKRKRAFEPDDMSQGAAKARQFLEAFVALPLETMDKMQALQEVKKLTDTLEKDAENCNWLQQFL 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01137 917 Gene3D DNA repair protein MutS, domain I 3 97 IPR016151 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 ProSitePatterns DNA mismatch repair proteins mutS family signature. 716 732 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 Pfam MutS domain I 9 104 IPR007695 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 Gene3D MutS, connector domain 98 267 IPR036678 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 Gene3D - 593 914 IPR027417 -
Gma17g01137 917 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 13 898 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Gma17g01137 917 Coils Coil 529 549 - -
Gma17g01137 917 Coils Coil 346 366 - -
Gma17g01137 917 Pfam MutS domain III 276 582 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 PANTHER DNA MISMATCH REPAIR PROTEIN MSH2 13 898 IPR032642 GO:0003677|GO:0005524|GO:0006298|GO:0032300
Gma17g01137 917 Pfam MutS family domain IV 445 542 IPR007861 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 SUPERFAMILY DNA repair protein MutS, domain III 273 587 IPR036187 -
Gma17g01137 917 Coils Coil 449 469 - -
Gma17g01137 917 SMART mutATP5 635 833 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 SMART DNAend 290 618 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 592 837 IPR027417 -
Gma17g01137 917 Coils Coil 889 909 - -
Gma17g01137 917 CDD ABC_MSH2_euk 606 836 - -
Gma17g01137 917 Pfam MutS domain V 638 836 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 PIRSF MSH2 2 917 IPR011184 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 Pfam MutS domain II 119 259 IPR007860 GO:0005524|GO:0006298|GO:0030983
Gma17g01137 917 Gene3D - 270 498 - -
Gma17g01137 917 Gene3D - 499 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01137 Gma-Chr17 9858089 9868768 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01137 K08735 - gmx:100792272 1792.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01137 17 9858089 9868768 Gma17g01137 17 9858089 9868768 ECH