Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00990 ATGGTGTACTCCTACTACACCCCCACGTACTACTCAACCCTCCATGACTCACTCACCTCTCTGTGCAAGACCATTCTTCCTTTCAGCTTCAAGAAACGACCGTTACCTGCGGCGGAACACAAATTGTCGAAACTGCAATCCGACAACCTTAAATGGCAGCAAGACTCTTTCCACCAGGTGCTGAACTTGATGGGTCTCCACAAAGAAGGCATCGTCGCTGAATCTGAAGTTTCGGCCTTCAGAACCCACTTGCTAGACACCCTCATTGCTTCTCCTCCAGAACAAGAACACCCCGTTATATTAAGAGATAAGCTTCTGTTTCTCCAGGAACTTCTCTATGCCAAGTGCATTTCTGAAGAAGAGTACCATTCTTCTAAGAGGCCATTACTCCAGAGACTGGCAGCACAGGGGGCTCAGATTGAAGCTAGGGATGTGATCGTGGCAAGGCCTAAGGACTCAAAAGAGAATTCAGAGGAAGAGTGGTCAGTGATTGATTTGAAGGATGAGAAGTGCTGGGTGAACAAAGAGAATTTGGGTAGTAAGAGCAAGTCCAATCAGGGATCAGCCATGAAGCAGATTAAAGGAGCAGCCTTGGTATTTGGCTTTGGCAAAGGTGGGAAAAATGGGGAAGAAAAGAGCATGTTTGACTCACCTTCTTTGTCTGCCAACAATGAATCAAGGGAAAACCCCTTCTGGGATGCTCAGACAAAGGAAAAACAAAGTGAAGGAAAGTCAATTCTTATGGAGGAAAGTGTGCCTCCAGAACCAGTGAAGGAGAGTGGCGGTTTGGACAAGTTGAAGAGGAAACCATTTAGAACTTTGTTTCATAAGGAGCAAAGTGGTGGTCCTGAACAAGATCAAAGATCGGGGAAATCAGGTAAAAAGCAATGGGGATTTGAAGGGTTCAAGAAATGGAGGAGAAATGAATCAGAAGAAGAGACAGCTCCTTTGCCTCTTAATGAGAGTGAGGAGGCCTATTCGGGTTCCTTAGCAAAGACACTTGGGGAGGGACCAGACACTAAGTTAATAAAGAAGAAGTTGCATTCTGATGGTTCCCCATCTGATTTTTTTATTGATAAGGTTTTGGGAGACAAGATAAAGAAGGAGTTGTCAAGAATCCAGACAGAACTGAGCAGCACAAACCCAAATCTTAAATTTTCGAATGATCAGATTGAAGCAATTTCTACAAGAATTCCAGTGGACAAGGCTGAGTTGAAAAATTACTTTCCCAAATCATGGTGTGACCGATACGGTGATGTTGTGCTGGATGTGGTGAAGAAAGAGTTCAAGGACCATGTTGCGGAAATGGAGAACAGGCGCAACATTGCTAGAGAAAAACAAAGCAACTCTAGGCGTTGGACAACAACAACATTTGACGGTGACGAAAACATTCATCCAAATCTTTTTGGTCATCGTGATAATAATTCAGTTCGTAGCAGTAACATTAATCCATTTTCTCATGGTTACGCTTAG 1473 0.4386 MVYSYYTPTYYSTLHDSLTSLCKTILPFSFKKRPLPAAEHKLSKLQSDNLKWQQDSFHQVLNLMGLHKEGIVAESEVSAFRTHLLDTLIASPPEQEHPVILRDKLLFLQELLYAKCISEEEYHSSKRPLLQRLAAQGAQIEARDVIVARPKDSKENSEEEWSVIDLKDEKCWVNKENLGSKSKSNQGSAMKQIKGAALVFGFGKGGKNGEEKSMFDSPSLSANNESRENPFWDAQTKEKQSEGKSILMEESVPPEPVKESGGLDKLKRKPFRTLFHKEQSGGPEQDQRSGKSGKKQWGFEGFKKWRRNESEEETAPLPLNESEEAYSGSLAKTLGEGPDTKLIKKKLHSDGSPSDFFIDKVLGDKIKKELSRIQTELSSTNPNLKFSNDQIEAISTRIPVDKAELKNYFPKSWCDRYGDVVLDVVKKEFKDHVAEMENRRNIAREKQSNSRRWTTTTFDGDENIHPNLFGHRDNNSVRSSNINPFSHGYA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00990 490 PANTHER OS09G0556800 PROTEIN 1 483 - -
Gma17g00990 490 MobiDBLite consensus disorder prediction 464 490 - -
Gma17g00990 490 Coils Coil 426 446 - -
Gma17g00990 490 MobiDBLite consensus disorder prediction 209 323 - -
Gma17g00990 490 MobiDBLite consensus disorder prediction 214 230 - -
Gma17g00990 490 MobiDBLite consensus disorder prediction 260 314 - -
Gma17g00990 490 MobiDBLite consensus disorder prediction 469 490 - -
Gma17g00990 490 MobiDBLite consensus disorder prediction 231 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00990 Gma-Chr17 8443680 8446306 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00990 - - gmx:100819771 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00990 17 8443680 8446306 Gma17g00990 17 8443680 8446306 ECH
Gma17g00990 17 8443680 8446306 Gma13g01460 13 29338489 29340581 GST
Gma17g00990 17 8443680 8446306 Gma15g01913 15 25692423 25695387 PCT
Gma15g01913 15 25692423 25695387 Gma17g00990 17 8443680 8446306 PCT