Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma17g00970 | ATGTTTTTGTCTCCCTTCAACTTCATCCTATCTTCTCTCTGCCTTTTTCTTCTCATTTTTCTTGCAACCTTACCTCGTAGTCCTACCCCCGAGTCAGTTTGCAAAATCATGGGTAGTGAGATAGATACTAAATCAATTGAACCGGTCCGGAATGCCGTTTCTTTGTTTGGAGATAAAAGTGATCAGAAGAAATATCAAACTGCGAGGAGTAAGAGTGAATGTGAAAAAGAATTTGAGGAGTTGACCAAGGAATTGGCCAACTGCAAAGTACAATTAGAAGCAAAGCATGCTGCACACATGCAATCACTTCTTAAGCTGGAGCACAACCAAAAGATGATTAATGAGTTGTCTACCCTGCTGAAGAAATCTGACCTCGAAAGAAACAAGAACATGAATGAATGTTCAGATTGCAAGGCTCTTAAAGATGAACTAGAGTCCAAGGTGAAAGAGATGGCTGATCAGAATTTGGAGACTGCAAAGGTCCGGGACCAGCTTTCACATGTTTTAAGTGAATTGAAGGCCACACAAAGGGAGCTTCTTAACAAAGAAACAAAACTTGTTGCTGCTAGAGATTTAGAACTGAACGCTTTGAAAAATGCAAAACAAATGGAATCTGCCTTGGAGGCCGAAAAGGAACAGAAAGAAGAACTCCTGCAGCAAGTGAAGGAGCTCAATGAAGTTATTTACGATTCAAAACTAGCTGCCATTGAATTTGAGAAAGAGAAGTTAGCTATATTGTCTGAGAAGGATGAGAAAATtgagttagcaacaaaagctactgctcaattagaacaacagttaaaagatatgagaaagcatgtagaaatgctacaaggattacaaaatcaaccaATGGATAAGTCTACACTGGTTGGTTCTCTTCCTTTGGAACCTATGCAAGCTAATGAAACACTGGTCATGGAACTAAAGGAGAGAAAGACCATGGACCAATCTGTGTACATTGAGAGACTAGAAATGGAATTGAGTAAGTTAAAACAAGAGCTTACTATTGCAAAGGAAGAAAGAAATTCCTTGAATATTACTACTGAATCACTCAAAAGTGAGTTACATGAGACTAAAGCAGCCCTAAACATGAACAAGGAGAGTGACATTGAAGCACAGGTGGAAATTGCATTGCTCAAATCTcagcttcaggaacataggttggctcacaagaatggacatgttactgaagtttccaaagctgatcggtcaaaggcagaagctgaagagcaaaatagtgagaataacaatgacagtgtcacaagcaaatccttagttgagaagagaaatgaagTTCAAGGATCGGTAGGGGAAGTTGGAAGATTTTCAGAGTTAGCATTGATGAAAAGGGAGCTGGAAAATGCATTAGTGAAAATTTCTGAGTTGAGGGCACGTGCAGAACAGGCTCTAAGCAGGGCTGAGTTTGCTGAGAATGCTAAAGCAGCATTAGAGGACAAAATAAGGAGACACAGGGAACATAGGCAGAGAAGGAGGGCTGCACTTACTGCACTTAGGGAGGAATCTACCCCTAAACCATTTAGTCCTTCCACATCATATGGAACACCTGGAACCTACCAGCCCTTAGGTAAGGTTCTGAATATGAAAATGTGA | 1614 | 0.3445 | MFLSPFNFILSSLCLFLLIFLATLPRSPTPESVCKIMGSEIDTKSIEPVRNAVSLFGDKSDQKKYQTARSKSECEKEFEELTKELANCKVQLEAKHAAHMQSLLKLEHNQKMINELSTLLKKSDLERNKNMNECSDCKALKDELESKVKEMADQNLETAKVRDQLSHVLSELKATQRELLNKETKLVAARDLELNALKNAKQMESALEAEKEQKEELLQQVKELNEVIYDSKLAAIEFEKEKLAILSEKDEKIELATKATAQLEQQLKDMRKHVEMLQGLQNQPMDKSTLVGSLPLEPMQANETLVMELKERKTMDQSVYIERLEMELSKLKQELTIAKEERNSLNITTESLKSELHETKAALNMNKESDIEAQVEIALLKSQLQEHRLAHKNGHVTEVSKADRSKAEAEEQNSENNNDSVTSKSLVEKRNEVQGSVGEVGRFSELALMKRELENALVKISELRARAEQALSRAEFAENAKAALEDKIRRHREHRQRRRAALTALREESTPKPFSPSTSYGTPGTYQPLGKVLNMKM | 537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma17g00970 | 537 | Coils | Coil | 399 | 424 | - | - | |
| Gma17g00970 | 537 | MobiDBLite | consensus disorder prediction | 414 | 430 | - | - | |
| Gma17g00970 | 537 | Pfam | Weak chloroplast movement under blue light | 41 | 412 | IPR008545 | - | |
| Gma17g00970 | 537 | Coils | Coil | 321 | 348 | - | - | |
| Gma17g00970 | 537 | PANTHER | HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED | 39 | 417 | - | - | |
| Gma17g00970 | 537 | PANTHER | HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED | 427 | 537 | - | - | |
| Gma17g00970 | 537 | Coils | Coil | 246 | 283 | - | - | |
| Gma17g00970 | 537 | Coils | Coil | 71 | 91 | - | - | |
| Gma17g00970 | 537 | MobiDBLite | consensus disorder prediction | 389 | 413 | - | - | |
| Gma17g00970 | 537 | Coils | Coil | 172 | 192 | - | - | |
| Gma17g00970 | 537 | MobiDBLite | consensus disorder prediction | 505 | 529 | - | - | |
| Gma17g00970 | 537 | MobiDBLite | consensus disorder prediction | 510 | 525 | - | - | |
| Gma17g00970 | 537 | PANTHER | EXPRESSED PROTEIN | 427 | 537 | - | - | |
| Gma17g00970 | 537 | PANTHER | EXPRESSED PROTEIN | 39 | 417 | - | - | |
| Gma17g00970 | 537 | MobiDBLite | consensus disorder prediction | 389 | 430 | - | - | |
| Gma17g00970 | 537 | Coils | Coil | 197 | 227 | - | - | |
| Gma17g00970 | 537 | Coils | Coil | 446 | 497 | - | - | |
| Gma17g00970 | 537 | Coils | Coil | 134 | 157 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma17g00970 | Gma-Chr17 | 8271764 | 8273894 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma17g00970 | - | - | gmx:102665346 | 940.643 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma17g00970 | 17 | 8271764 | 8273894 | Gma17g00970 | 17 | 8271764 | 8273894 | ECH | |
| Gma17g00970 | 17 | 8271764 | 8273894 | Gma05g00234 | 05 | 2144379 | 2145094 | GST |