Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00949 ATGAACTTCAATCTTGCATTAGTGATTATAGTATCCACAATTTTGGGAATTGGGCTTGAAGGATGCGATAGCAAGGTTGTGCAGTTCATTTTTGGAGACTCACTCTCGGATGTTGGAAATAACATGCATCTCTCAAGAAGCCTTGCCCAGGCAAGCTTGCCTTGGTATGGTATAGACATGGGTAACGGGTTACCTAATGGAAGGTTCACTAATGGTCGCACAGTGGCTGACATAATAGGTGATAATATGGGCCTCCCTAGGCCTCCTGCATTCCTGGACCCATCTGTAAATGAAGAAGTTATACTTGAAAACGGTGTGAACTATGCTTCTGGTGGTGGCGGCATCTTGAATGAAACTGGCGCCTATTTTATCCAAAGGTTTTCTCTGGACAAACAAATTGAGCTGTTTCAGGGGACACAAAAGTTAATTAGAGGCAAAATTGGAAAAAGGGCCGCGTACAAGTTTTTCAAGGAAGCTAGTTATGTTGTTGCTTTAGGGAGCAATGACTTTATCAACAACTACTTGATGCCTGTTTACACTGATTCATGGACATACAATGATGAAACCTTCATGGACTACTTAATAGGAACATTGGAAAGACAACTAAAGCTACTTCATAGTTTAGGAGCAAGACAACTGGTGGTTTTTGGGTTGGGTCCAATGGGTTGCATTCCCCTTCAAAGGGTGCTTACTACAACTGGGAATTGTCGAGAAAAAGCAAACAAGCTGGCTCTTACCTTCAACAAAGCTTCAAGCAAGTTAGTTGATGACTTGGCGAAGGACTTTCCTGATTCAAGTTATAAATTTGGAGATGCATATGATGTTGTTTATGATGTGATTAGCAGTCCAAATAAGTATGGATTCCAAAACGCAGACTCGCCCTGTTGTTCCTTTTGGAATATTCGACCCGCCCTTACATGTGTACCTGCATCAAGTCTGTGCAAAGATAGAAGCAAATATGTCTTTTGGGATGAGTACCACCCCACAGACAGTGCTAATGAGCTAATTGCAAATGAACTCATCAAGAAATTTGGACTTTCAAATACTAATCAAGGAAGTGTACCTTCCCCAGCACCTGCTGTTGCTCCATCCCCGGATGACCAATGA 1107 0.421 MNFNLALVIIVSTILGIGLEGCDSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDNMGLPRPPAFLDPSVNEEVILENGVNYASGGGGILNETGAYFIQRFSLDKQIELFQGTQKLIRGKIGKRAAYKFFKEASYVVALGSNDFINNYLMPVYTDSWTYNDETFMDYLIGTLERQLKLLHSLGARQLVVFGLGPMGCIPLQRVLTTTGNCREKANKLALTFNKASSKLVDDLAKDFPDSSYKFGDAYDVVYDVISSPNKYGFQNADSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDSANELIANELIKKFGLSNTNQGSVPSPAPAVAPSPDDQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00949 368 MobiDBLite consensus disorder prediction 348 368 - -
Gma17g00949 368 Gene3D SGNH hydrolase 27 345 IPR036514 -
Gma17g00949 368 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Gma17g00949 368 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Gma17g00949 368 SUPERFAMILY SGNH hydrolase 157 343 - -
Gma17g00949 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 358 - -
Gma17g00949 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00949 Gma-Chr17 8089984 8093003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00949 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 31.847 3.77e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00949 - - gmx:100815129 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00949 17 8089984 8093003 Gma17g00949 17 8089984 8093003 ECH
Gma17g00949 17 8089984 8093003 Gma05g00255 05 2318134 2320156 GST