Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00942 ATGTCAGACAAGAACATGGTTCCCTCAAGATTTATATTTTGTGTAATTGTCATTGCTGTGTTCCTTTTGGTGCTGTCTTCCTTTTTCCTCATCCACTTGAGCAATCACTCATTCATTCCTAGATCAGTTTCGGAACTTGTTCTTGTTAACAACACATCCCTTGATTTCAAACCCAATTTCAAGAGGGAACAAGTTCAACCACAAAGCTGTCAATTTTCCAATTCTAGCCACAAATCAAGTTCCCCAAGACAGCAGAGGAAGATACCATGCGATCCAACTAATGCTCTCTTAAGGGTGTTCATGTATGACTTGCCTCCAGAGTTTCACTTTGGGCTATTGGATTGGAAAGGGAATGTGAACCAAACATGGCCTAATGTGAATAACCCAAAACACATTCCACCTTATCCAGGTGGCCTTAATTTGCAGCATAGTGTGGAATACTGGCTCACCCTTGATCTTCTGTCCTCAAACATCGCGGAAAATTTTCGGCCTTGCACTGCAATTAGAGTGCAGAATTCGAGACAAGCAGATGTGGTTTTTGTGCCATTTTTCTCATCTTTGAGTTACAACCGGCATTCCAAAATCCATGGGAAGGAAAAAGTTAGTGTTAACAGAATGTTGCAACAGAGATTGGTACAGTTACTAATGGAGAGGGAAGAATGGAAACGTTCTGGAGGGAGGGATCATGTGATTGTGGCACACCATCCTAACAGCATTCTGCGTGCAAGAAGAAAGTTGGGCTCTGCCATGCTTGTGCTTGCAGATTTTGGAAGATACCCTTCTCAATTAGCAAACATTAAGAAGGATATAATTGCTCCATATAGACATCTAGTAAGTACTGTACCAAGAGCTGAGTCAGCTTCATATGAGGAACGTTCTACACTTCTATATTTCCAGGGGGCAATATATAGGAAAGATGGAGGAGCTATTCGCCAAAAGCTATATTACCTCCTGAAAGATGAGAAAGATGTGCATTTTGCATTTGGAAGCATCAGAAAAAATGGGATTAATCAAGCAAGCCAAGGCATGGCCTTATCCAAATTTTGCCTTAACGTTGCTGGAGATACCCCATCCTCGAATCGCCTCTTTGATGCCATTGTGAGCCACTGTGTTCCTGTGATCATTAGTGACGAAATTGAGCTACCATTTGAAGATGTTTTGGACTACTCAGAATTCGGCTTGTTTGTCCATGCCTCGGATGCTGTAAGGAAAGGCTACCTGCTCAATCTCCTTCGTTCAATCAAGCCAGAGAAATGGACCCAGATGTGGGGAAGGCTAAAGGATATTACACAGCACTTTGAGTATCAATATCCAAGCCAGCCTGGGGATGCAGTGAATATGATTTGGGAGGAAGTTGCACATAAGATATCTTCATTACAATTCAATTTGCACAGGAAAAACAGATACCAGAGACCTTAG 1419 0.4207 MSDKNMVPSRFIFCVIVIAVFLLVLSSFFLIHLSNHSFIPRSVSELVLVNNTSLDFKPNFKREQVQPQSCQFSNSSHKSSSPRQQRKIPCDPTNALLRVFMYDLPPEFHFGLLDWKGNVNQTWPNVNNPKHIPPYPGGLNLQHSVEYWLTLDLLSSNIAENFRPCTAIRVQNSRQADVVFVPFFSSLSYNRHSKIHGKEKVSVNRMLQQRLVQLLMEREEWKRSGGRDHVIVAHHPNSILRARRKLGSAMLVLADFGRYPSQLANIKKDIIAPYRHLVSTVPRAESASYEERSTLLYFQGAIYRKDGGAIRQKLYYLLKDEKDVHFAFGSIRKNGINQASQGMALSKFCLNVAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFGLFVHASDAVRKGYLLNLLRSIKPEKWTQMWGRLKDITQHFEYQYPSQPGDAVNMIWEEVAHKISSLQFNLHRKNRYQRP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00942 472 MobiDBLite consensus disorder prediction 68 89 - -
Gma17g00942 472 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 3 468 IPR004263 GO:0006486|GO:0016757
Gma17g00942 472 Coils Coil 204 224 - -
Gma17g00942 472 MobiDBLite consensus disorder prediction 68 88 - -
Gma17g00942 472 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 3 468 - -
Gma17g00942 472 Pfam Exostosin family 96 409 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00942 Gma-Chr17 8064036 8066011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00942 - - gmx:100809635 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00942 17 8064036 8066011 Gma17g00942 17 8064036 8066011 ECH
Gma17g00942 17 8064036 8066011 Gma05g00261 05 2343642 2344573 GST