Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00917 ATGGATCGTCAATGGCGTCCTGCTCCTCCACCCAATGTCTGCCCCTCTTGCTTCCACCCCCACTTCCCCTTTTGCCCTCCTCCACCCCCCTATTATCACCCTCACCCCCCCTTCCCTTACGCCAACTTCAAGAGACCCCGAATCGACGACAACCCTATCAATTTCTCCGACGACGAACGCAGATTAAAGCTCATTCGCGATCACGGATTCCACACTTACGCGCCACACCCTAATCACAAGGACTTCCCTCCCCACAATGCTCAATTCAGATCTTCCCCTCACCCCTTCCATGCTTACCCGGACCCCTCGCAGCACCGCGTTCCCGACGCTTACCATCACGCTCACGCTCCTCATGTTGCCATGCACGAAGGGAACCACCAGCACAATTTCAATGGAAGAGTAGTTCACTATCCTTATCCCTACCCTGCTGCGGGTAACAATAGCAACGATAATAATAATAATAATAATATGGAGCCTTCGAGATTCTTCAGGGGACAGCCTCAGCCTCCGCTTCCTTCTTCGCCGCCGCCACCTCTTCCCATGGAACCGTCCATGAATCAATTGAAACCGCCTTCTCTTTTTCCCGTTGCCGAATCTCAACCCATGTCTCAGCCCTATTATCACCCCTCTGCTTTTCCTTCCGAGCAGGAAGCATCGAAGCAGCAGTACTTGGGAGATTCCCAATCTTTTTCGTTAAACCAATTGGCTGCAGAGAGACCTAAAGTGATCGATGCGTCGCACTTATTTCGCCATCCTCATCGAGCTTCGCGGCCTGATCATTTTGTCATCATCTTTCGAGGCCTCCCAGGTAGTGGTAAGAGTTACCTAGCAAAGATGTTGCGTGATCTTGAGGTTGAAAATGGTGGTGATGCTCCTCGAATTCATTCCATGGATGATTATTTTATGACTGAGGTTGGAAAGGTTGAGGATGGCGAGGCATCAAAATCTTCAAGTTCAGGCAGAAACAAGAAGCCTGTGACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCTTTCAAGAAAAATGTTGAGGAAGGAGTTTTCACCTTTATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGGTATGAAGTTTACATTTTAGAAGCTACATACAAGGATCCGGTGGGTTGTGCTGCAAGGAATGTCCATGGATTTACACAGGAAGACATAGAAAAGATGTCTAAGCAATGGGAAGAAGCTTCATCCTTGTATCTGCAGCTTGATGTGAAGTCATTATTTCATGGAGATGATCTAAAGGAAAGCAGAATACAGGAGGTTGACATGGATATGGAAGATGATCTAGGTGATGCATTACCTCCATTTCAAGGAAAAGAAGATGAGAAAGTTGTTGACCCTCCTGTTGGGGAAGATGCAAGTTTCCTAAAGGCTGGGAAGAATTGGCATGCTGAAGAGGAACATCCAACAGAAGTCAGGGAATTGGGTAAAAGCAAATGGTCAGAAGATTTTGGTGAAGATGACATTGATCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATAAGGGTGGCAAAACAGGGTTTTCAATAGGGGCTGCAAGGAAGGTAAATGCTTTGTCGTTAGTGATCGGACCTGGTGCTGGATATAACCTGAAATCTAATCCATTACCTGAAGAGGATAGTCCAACCCGTAATAGTGTGGAGTCAAAGAAGCATAGCATATTTCAAGAACAAATCCGGGCTGAACGAGAATCTTTCAAAGCTGTTTTTGATAGGAGACGGCACAGGATTGGTGGGCTTGATGTGGAGGAGGACTGa 1905 0.4651 MDRQWRPAPPPNVCPSCFHPHFPFCPPPPPYYHPHPPFPYANFKRPRIDDNPINFSDDERRLKLIRDHGFHTYAPHPNHKDFPPHNAQFRSSPHPFHAYPDPSQHRVPDAYHHAHAPHVAMHEGNHQHNFNGRVVHYPYPYPAAGNNSNDNNNNNNMEPSRFFRGQPQPPLPSSPPPPLPMEPSMNQLKPPSLFPVAESQPMSQPYYHPSAFPSEQEASKQQYLGDSQSFSLNQLAAERPKVIDASHLFRHPHRASRPDHFVIIFRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVGKVEDGEASKSSSSGRNKKPVTKKVMEYCYEPEMEEAYRSSMLKAFKKNVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQWEEASSLYLQLDVKSLFHGDDLKESRIQEVDMDMEDDLGDALPPFQGKEDEKVVDPPVGEDASFLKAGKNWHAEEEHPTEVRELGKSKWSEDFGEDDIDQTEGMKGNINALSGLIHQYGKERKSVHWGDKGGKTGFSIGAARKVNALSLVIGPGAGYNLKSNPLPEEDSPTRNSVESKKHSIFQEQIRAERESFKAVFDRRRHRIGGLDVEED 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00917 634 MobiDBLite consensus disorder prediction 165 185 - -
Gma17g00917 634 Gene3D - 261 428 IPR027417 -
Gma17g00917 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 424 IPR027417 -
Gma17g00917 634 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 210 623 IPR026314 GO:0005634
Gma17g00917 634 MobiDBLite consensus disorder prediction 578 604 - -
Gma17g00917 634 MobiDBLite consensus disorder prediction 197 220 - -
Gma17g00917 634 MobiDBLite consensus disorder prediction 135 220 - -
Gma17g00917 634 MobiDBLite consensus disorder prediction 144 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00917 Gma-Chr17 7825940 7834596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00917 K17602 - gmx:100804293 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00917 17 7825940 7834596 Gma17g00917 17 7825940 7834596 ECH
Gma17g00917 17 7825940 7834596 Gma05g00284 05 2571028 2578491 GST