LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma17g00874	ATGCTGCCGAGTACTAGTAACTTAAAGTTTTCTCGGTGGACTTTCTTCAAACACCTTACGCCACGGAAATTCAAATTAACACCACCGCTCTGTCAGCACAAATCCCTTGCCACTCTCTCCCACTTCGGAACCCTAACCTCCCGCCAGAAAGACCAGATTCATCTATACGTTGAAACTCTTCTGCAATGGAACAAGGTATTCACAGTTAGAGAGCTGAGTCTCGTCGATGTCGGAACTGGCGCTGGCCTTCCCGGAATAGTTTTGGCCATAACACGCCCTGAGTGGGATGTAACGCTGATGGAGTCTATGAACAAGCGGTGCGTCTTCTTGGAGCACGTTGTCGGTGTTATCGGTTCCTCAAACATTCAAATTGTAAGAGGAAGAGCAGAGAGTTTAGGGCAGGATCCTTGCTTCAGAGAGCAATTTGATGTAGCAGTGGCCAGGGCGGTTGCAGAGATGAGGATATTAGCTGAATATTGTCTTCCTTTGGTTCGTGTTGGTGGGTTGTTTATTGCTGCCAAGGGTCATGATCCTGAGGATGAAATTAAAAAAGCTGAAAGTGCCATCCAGAAGGTGGGTGCATCTCTATTGCAAGTATGCTCAGGTTTTTAA	612	0.469	MLPSTSNLKFSRWTFFKHLTPRKFKLTPPLCQHKSLATLSHFGTLTSRQKDQIHLYVETLLQWNKVFTVRELSLVDVGTGAGLPGIVLAITRPEWDVTLMESMNKRCVFLEHVVGVIGSSNIQIVRGRAESLGQDPCFREQFDVAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPEDEIKKAESAIQKVGASLLQVCSGF	203

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma17g00874	203	Pfam	rRNA small subunit methyltransferase G	67	199	IPR003682	GO:0005737\|GO:0006364\|GO:0008649
	Gma17g00874	203	PANTHER	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN	70	201	IPR003682	GO:0005737\|GO:0006364\|GO:0008649
	Gma17g00874	203	PANTHER	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN	3	66	IPR003682	GO:0005737\|GO:0006364\|GO:0008649
	Gma17g00874	203	Hamap	Ribosomal RNA small subunit methyltransferase G [rsmG].	18	198	IPR003682	GO:0005737\|GO:0006364\|GO:0008649
	Gma17g00874	203	CDD	AdoMet_MTases	74	171	-	-
	Gma17g00874	203	TIGRFAM	rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	56	199	IPR003682	GO:0005737\|GO:0006364\|GO:0008649
	Gma17g00874	203	Gene3D	Vaccinia Virus protein VP39	30	202	IPR029063	-
	Gma17g00874	203	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	41	199	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma17g00874	Gma-Chr17	7433186	7435991	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma17g00874	K03501		-	gmx:100818428	358.221

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma17g00874	17	7433186	7435991	Gma17g00874	17	7433186	7435991	ECH
	Gma17g00874	17	7433186	7435991	Gma05g00324	05	2984319	2990375	GST