Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00857 ATGCGATCCTCAAGCATTCGCAGCTTCACCATCTTCACCCTCTTTCTCATTGCGATCCTCCCCCACGGACACGCAACAACTCCAACCTCCAAACTTCGCCTCAAACCTCTCTCTTCTCCCTTTTCAACCGCCCTCGAAACCCTCCAGAAACAACTCGGGTACACCTTCAAGAGCATCGATCTTCTTCGTCGCGCCATGACACACGCTTCCTTCTCCGAAGAAAACAACAAAGCTTTCGCCATTCTCGGCGCCAGCGTCATCGAAACCTCCGTCTCTTTCCATCTGCTCTCCAGAGACGTTGATCTTTCTTCCAAAGAGCTGAACCGTCGATTGTCCCAAATCACCAACGTCGATTCCTCCTGCGCCGTCGACGGAACGCGATTAGGGTTGCACAAGGTGGTTCGCGTCTCGCCCAAGACAAATTCCTCCGCCCCCGCCGTCGTTTGCGGCGCCTTCCGAGCAATCTTTGGCGCTGTTGCTATTGACACCGGCAAGTCCGATGACGCAGGCAACGTTTTCTGGAACCTTCATGGCGGTGGTGACCTAGGAGTTGCCGTGGCTCTTTGA 567 0.5467 MRSSSIRSFTIFTLFLIAILPHGHATTPTSKLRLKPLSSPFSTALETLQKQLGYTFKSIDLLRRAMTHASFSEENNKAFAILGASVIETSVSFHLLSRDVDLSSKELNRRLSQITNVDSSCAVDGTRLGLHKVVRVSPKTNSSAPAVVCGAFRAIFGAVAIDTGKSDDAGNVFWNLHGGGDLGVAVAL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00857 188 PANTHER RIBONUCLEASE III 34 164 IPR011907 GO:0003723|GO:0004525|GO:0006364
Gma17g00857 188 Pfam Ribonuclease-III-like 60 166 IPR000999 GO:0004525|GO:0006396
Gma17g00857 188 SUPERFAMILY RNase III domain-like 38 169 IPR036389 GO:0004525|GO:0006396
Gma17g00857 188 SMART riboneu5 60 187 IPR000999 GO:0004525|GO:0006396
Gma17g00857 188 CDD RIBOc 60 167 IPR000999 GO:0004525|GO:0006396
Gma17g00857 188 ProSiteProfiles Ribonuclease III family domain profile. 45 164 IPR000999 GO:0004525|GO:0006396
Gma17g00857 188 Gene3D Ribonuclease III domain 43 178 IPR036389 GO:0004525|GO:0006396
Gma17g00857 188 PANTHER RIBONUCLEASE 3 34 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00857 Gma-Chr17 7273643 7274826 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00857 - - gmx:100527745 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00857 17 7273643 7274826 Gma17g00857 17 7273643 7274826 ECH