Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00825 ATGTCTTCTATAGAAATAGTGGATTTATGCAATAGTGATGATGACGAAGTGGAAAATGTAGGTTCCGAACCTGCAAAGAAACTAATTGAAATCAAGAAGGAAACATGCCAAGTAACGGAGAATATAATACAAGTAGCGTCTGAAGGAAATAGAAGCTCTAGTGCTCTAAGCACTTGTCATAGCTATTCCACTCGTCAAATGGAAGAAATGGTAGCGCCGTTGTATGTTGACGTTGATGACACAACTGGTCTTTCTCTGCCACCATTTTGTAGAAACTTCTGGAGAGCTGGATACCATCATGATAATAATGGCCTTTCTTCTAAACTCAACTTCCCAAATACTGGAAACTACTTGCATGTTCACCCTTTCTTCCTTCACTCAAATGCAACTTCACATAAGTGGGTATTTGGTGCTATTGCTGAGCTTATCGATAATGCAGTTGATGAGATCCAAAATGGGGCTACTTTTGTCTTTGTAGATAAAATTTTAAATCCAAAAGATGGAAGTCCAGCGTTGTTGATTAGAGACGATGGTGGTGGAATGGATCCAGAAGCAATGCGTCAATGCATGAGTTTTGGATTTTCAAACAAGTCAAAAATTGCAATTGGACAGTGTATGGACTTTGGCATTCTGTTTGCAATGATTTTGATACTTTCTTTTGTGTTTATTTTTCCTTTTGGCCTTGTAGATGGAAATGGCTTCAAGACTGGTAGTATGAGACTGGGTGCAGATGTCATTGTCTTCAGCCGCCACCAGAATAATATGAAATTGACTCAAAGCATTGGACTTCTGTCTTATACATACTTGATGCAAACACAGCAAGACAGAGTTGTAGTCCCCATGGTGAATTATAAGTTTGATACATCAACTGGATACTTGGAAAGACTAAATGACGGAGAGCATTTTAGGTCGAATTTGTCCATACTGTTGCACTGGTCTCCATATCTATCAGAAGAAGAACTTCTGAAACTATTTGATGACATTGGAAATCATGGTACTAAAATTATTATCTTCAATTTATGGTTCAATGATGATGGCAATTTGGAGCTAGACTTTAATTCTGATCCCGAGGATATTCATATTGTCGGGGATATCAAGAAGATTGACACACATTCTGCCTCAAAGATAGTAAATGAGGGACACATTGCTAACCGTTTTCATTATTCTTTACATGCTTACTTGTCCATATTGTACTTGCGGATACCAGAAAGTTTTAGAATGATATTGCGAGGGCAAGTTGTGAAGCTACATAACATTGCAGATGATCTCAAATATACTGAATTTGTCTTGTATAGACCACAGTGTGGTAGTTCTAAAGAGGGAGTATCTGTAACAACAATTGGATTTGTTAAGGAAGCTCCTAAAGGGAACATCCATGGCTTCAATGTATATCACAAAAATCGGCTGATACTGCCATTTTGGAAGGTTGTAAACTATACAAATACTAGGGGTAGAGGAGTTGTTGGAATCTTGCAAGCAGATTATCTTGAGCCAACTCATAATAAGCAGGATTTTGAGAGAACTTCCCTGTTTCAAAAACTTGAACTACGCCTGAAGCAAATGACATGGGAGTACTGGGATTATCACTGTCATCTGATTGGGTATTGTAAAAGAAGCACTGGAGATCCAGGTGCTCCTCTTAATAAAAGGAAGACACATGGATCTATAGACCTTCATAAGATGAAAAGGCAAGCAATGCAAGAAAATGTTACAGTTGCTGGATGTGATCAGAATGTACTGACAACTGCATCTCCTACAGACCAGACGGTAGACCAAAGAATTATAAACTTGATGGAAGTGCAGAAAAAACTCTTGAAAGAATGTTTGAAATATGAAAAGGCAGAGGAAGAACTTAATCTTAAGGTTACACAGCTTAGAAGAAAAACTCAGGAAGCTAAGCATGAGTATGATACACTTATGGCCGAAGTAAAGTCCCTTGGATTATATTTATGGGAAGAAAATGGTAGTGTAGCTGTACCTCTTGTTTTTTAG 1992 0.3795 MSSIEIVDLCNSDDDEVENVGSEPAKKLIEIKKETCQVTENIIQVASEGNRSSSALSTCHSYSTRQMEEMVAPLYVDVDDTTGLSLPPFCRNFWRAGYHHDNNGLSSKLNFPNTGNYLHVHPFFLHSNATSHKWVFGAIAELIDNAVDEIQNGATFVFVDKILNPKDGSPALLIRDDGGGMDPEAMRQCMSFGFSNKSKIAIGQCMDFGILFAMILILSFVFIFPFGLVDGNGFKTGSMRLGADVIVFSRHQNNMKLTQSIGLLSYTYLMQTQQDRVVVPMVNYKFDTSTGYLERLNDGEHFRSNLSILLHWSPYLSEEELLKLFDDIGNHGTKIIIFNLWFNDDGNLELDFNSDPEDIHIVGDIKKIDTHSASKIVNEGHIANRFHYSLHAYLSILYLRIPESFRMILRGQVVKLHNIADDLKYTEFVLYRPQCGSSKEGVSVTTIGFVKEAPKGNIHGFNVYHKNRLILPFWKVVNYTNTRGRGVVGILQADYLEPTHNKQDFERTSLFQKLELRLKQMTWEYWDYHCHLIGYCKRSTGDPGAPLNKRKTHGSIDLHKMKRQAMQENVTVAGCDQNVLTTASPTDQTVDQRIINLMEVQKKLLKECLKYEKAEEELNLKVTQLRRKTQEAKHEYDTLMAEVKSLGLYLWEENGSVAVPLVF 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00825 663 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 5 542 IPR045261 GO:0016887
Gma17g00825 663 PANTHER PROTEIN MICRORCHIDIA 6 5 542 - -
Gma17g00825 663 Gene3D - 123 273 IPR036890 -
Gma17g00825 663 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 136 258 - -
Gma17g00825 663 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 540 642 IPR045261 GO:0016887
Gma17g00825 663 Pfam Morc6 ribosomal protein S5 domain 2-like 388 526 IPR041006 -
Gma17g00825 663 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 134 199 IPR036890 -
Gma17g00825 663 Coils Coil 597 642 - -
Gma17g00825 663 PANTHER PROTEIN MICRORCHIDIA 6 540 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00825 Gma-Chr17 6958530 6971695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00825 - - gmx:100779850 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00825 17 6958530 6971695 Gma17g00825 17 6958530 6971695 ECH