Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00805 ATGGCCTTAGTTCTGCAAAAGGCGACGCCTCCTCCTTCAGTTCTCGCTGCCTCCACCCATGCCAACAAGCTACCCACGCCTGTCATCTCTGAACCTTCTGCCACTCATGCCCTTCCTCCTAAAGGAATCAGTACAATGTCTAGGACCCAATCAAGCCATCCTTTGGACCCTTTATCTGCAGCCGAAATCTCTGTGGCAGTGGCAACTGTGAGGGCAGCTGGAGCCACTCCTGAGCTCAGAGACAGTATCCGCTTTATTGAAGTAGTTTTGTTGGAACCAGATAAACATGTTGTTGCACTGGCAGATGCTTATTTCTTTTCTCCTTTCCAACCATCATTGCTTCCTAGAACTAAAGGAGGAGCAGTAATTCCAAGTAATCTCCCTCCAAGATGTGCTAGAATTGTTGTTTACAATAAGAAGACAAATGAGACTAGTATATGGATTGTTGAATTATCACAAGTACATGCTGTAACTCGAAGAGGTCATCACCGTGGAAAAGTAATTTCATCACAGGTTGTTCCAGATGCTCAGCCTCCAATGGATGCTATGGAATATGCAGAATGTGAAGCTGTTGTTAAAGATTTCCCTCCATTTAGAGAGGCTATGAAGAAAAGGGGCATTGAAGACATGGATCTTGTAATGGTTGATGCCTGGTGTGTTGGTTATTACAATGAAGCTGACGATCCCAACCGTAGACTTACTAAGCCACTTATATTTTGCCGGGGCGAAAGTGACAGCCCTATGGAAAATGGCTATGCACGCCCGGTTGAGGGAATCTATGTGCTTGTTGATATGCAAAACATGCTGGTGATTGAATTTGAAGACCGTAAATTTGTTCCTCTGCCTCCAGTTGATCCCTTGAGGAGGTATACACACGGTGAAACAAGAGGTGGATTTGATAGAAGTGACATAAAACCCTTGCAAATTATTCAGCTTGAAGGCCCAAGCTTTCGTGTCGATGGATCTTATGTTGCATGGCAAAAGTGGAACTTTCGTATTGGATTCACTCCTAGAGAAGGTTTGGTTATATATTCGGTTGCATATATTGATGGTAGTCAAGGGCGAAGGCCTGTAGCACATAGACTGAGTTTTGTGGAGATGGTTGTGCCATATGGAGATCCAAATGAACCACATTACAGGAAGAATGCCTTTCATGCTGGGGAAAATGGCTTGGGAAAAAATGCACATTCTCTCAAGAAGGGGTGTGATTGTTTGGGCTACATCAAATACTTTGATGCTCATTTCACAAATTTCACTGGTGGAGTTGAGACAATTGAAAATTGTGTATGTTTGCATGAAGAGGATCATGGAATTCTTTGGAAGCATCATGATTGGAGAACTGGCTTAGCAGAAGTCCGAAGATCTAGAAGACTTTCAGTTTCTTTTATGTGTACTGTGGCTAACTATGAGTATGGATTTTTTTGGTACTTTTATCAGGACGGAAAAATTGAATCTGAAGTTAAGCTAACCGGAATTCTAAGTTTAGGATCCTTGTTACCTGGAGAGTTTCGTAAATATGGAACCACGATTGCGCCAGGTTTATATGCTCCAGTTCATCAACACTTTTTTGTAGCTCGCATGAACATGACTGTGGATTCTAAACCTGGCGATGCTTTGAATCAGGTCGTGGAGATCAATGTCAAAGTTGAGGAACCAGGGGACAATAATGTTCACAATAATGCATTTTATGCTGAAGAGACTCTGCTCAAATCTGAATTGGAAGCCATGCGTGATTGCAATCCTTTGGCTGCTCGACATTGGATTGTAAGGAACACGAGAATAGGCAATAGAACTGGACAGTTGACAGGCTATAAGTTGGTACCTGGCTCAAACTGCTTACCATTGGCAGGTTCTGAGGCCAAGTTTCTAAGAAGAGCTGCTTTCTTGAGGCATAATCTTTGGGTAACACCCTATTCACACGATCAAATGTTTCCTGGGGGAGAATTTCCTAATCAAAATCCACGTGTCAGCCAAGGACTAGCTACATGGGTTAAGCAAAACCGATCATTGGAAGAAACTGATATAGTTCTTTGGTATGTATTTGGAATCACACAGGTTCCTCGTTTGGAAGACTGGCCAGTTATGCCAGTAGAACGCATCGGTTTTATGCTCATGCCTCATGGATTCTTCAACTGTTCTCCTGCAGTGGATGTCCCTCTGCCAAGTCCATGTGAGTTGGATTCTAAAGAAAATGACATGAATGAAACTGAGGCTTCAAAGGAAATTGAGGGTTGTGTATTAGTGGCAAAACTTTAG 2256 0.4282 MALVLQKATPPPSVLAASTHANKLPTPVISEPSATHALPPKGISTMSRTQSSHPLDPLSAAEISVAVATVRAAGATPELRDSIRFIEVVLLEPDKHVVALADAYFFSPFQPSLLPRTKGGAVIPSNLPPRCARIVVYNKKTNETSIWIVELSQVHAVTRRGHHRGKVISSQVVPDAQPPMDAMEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDAWCVGYYNEADDPNRRLTKPLIFCRGESDSPMENGYARPVEGIYVLVDMQNMLVIEFEDRKFVPLPPVDPLRRYTHGETRGGFDRSDIKPLQIIQLEGPSFRVDGSYVAWQKWNFRIGFTPREGLVIYSVAYIDGSQGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFHAGENGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHHDWRTGLAEVRRSRRLSVSFMCTVANYEYGFFWYFYQDGKIESEVKLTGILSLGSLLPGEFRKYGTTIAPGLYAPVHQHFFVARMNMTVDSKPGDALNQVVEINVKVEEPGDNNVHNNAFYAEETLLKSELEAMRDCNPLAARHWIVRNTRIGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLRHNLWVTPYSHDQMFPGGEFPNQNPRVSQGLATWVKQNRSLEETDIVLWYVFGITQVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPLPSPCELDSKENDMNETEASKEIEGCVLVAKL 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00805 751 Pfam Copper amine oxidase, N3 domain 178 282 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Gma17g00805 751 Gene3D Copper amine oxidase, catalytic domain 294 720 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Gma17g00805 751 SUPERFAMILY Amine oxidase catalytic domain 301 719 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Gma17g00805 751 Pfam Copper amine oxidase, N2 domain 53 99 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Gma17g00805 751 MobiDBLite consensus disorder prediction 40 55 - -
Gma17g00805 751 Gene3D - 41 180 - -
Gma17g00805 751 Gene3D - 183 285 - -
Gma17g00805 751 MobiDBLite consensus disorder prediction 29 55 - -
Gma17g00805 751 Pfam Copper amine oxidase, enzyme domain 307 715 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Gma17g00805 751 SUPERFAMILY Amine oxidase N-terminal region 177 292 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Gma17g00805 751 PANTHER COPPER AMINE OXIDASE 32 737 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Gma17g00805 751 PANTHER AMINE OXIDASE 32 737 - -
Gma17g00805 751 SUPERFAMILY Amine oxidase N-terminal region 51 178 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00805 Gma-Chr17 6732520 6740107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00805 K00276 - gmx:100817454 1547.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00805 17 6732520 6740107 Gma17g00805 17 6732520 6740107 ECH