Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00790 ATGTTCCGCATAAGCAACACTGTGGTCGGAGCCCTCAACGTGCTATCCCTTCTGCTGGGCATCGCCGCCGTGGGCTCCTCCGCATACATCCACGTCCGCGGCGGCTCCGACTGCCAGAAGGTGCTGCAGGTGCCGCTCCTCGTGGGTGGAATCTTCGTGGTGCTGGTCTCGGCCTTGGGAATCGTGGGGTCGCTGTGCCGCGTGAACGGGGCGCTCTACGCGTACCTGTTGGTGACGTTCATGGTGATCGTGGGGCTGGCGTTCTTCACCGTGTTCGCGCTCTTCGTTACCAACAGGAAGGTGGGCCAGCGGGTTTCCGGCAAGGGCTACGGCGAGTACAGGGTCGCCGATTTCTCTCACTGGCTGCAGCGCTACGTGGTTAACAACAAGAACTGGGACGAGGTCAAGAGTTGCTTGATGGACGCCCACGTCTGCCAGAACCTCGCCCTCAACGGTGGCCGCAACAACGACTCTCTCATTTTCAAACACTTTTCTACCACCCAGGCTGGGTGCTGTAAACCACCAGTGTATTGTGGATTCATAATGAAGAATGCTACGTTCTGGGAAGTGCCAAAGAAGGGTCCAGCAGCGAATAATAATACTGATTGCAGCACTTGGAACAATAGTAAGGAGAAACTGTGCTACGATTGCAATTCATGCAAAGGAGGAGTGCTGGCCAACATAAGGAACCAGTGGAGGCGTCTCACCGTATTCAACGCATGTGTGCTTGTGCTCGTCACCGCCATTTACGCCTTGGGCTGCTACGCCATCAAAAACAACAGATCCGATTCCCACTGCAACCACCGCAAACCACCCATCCCTTGA 825 0.56 MFRISNTVVGALNVLSLLLGIAAVGSSAYIHVRGGSDCQKVLQVPLLVGGIFVVLVSALGIVGSLCRVNGALYAYLLVTFMVIVGLAFFTVFALFVTNRKVGQRVSGKGYGEYRVADFSHWLQRYVVNNKNWDEVKSCLMDAHVCQNLALNGGRNNDSLIFKHFSTTQAGCCKPPVYCGFIMKNATFWEVPKKGPAANNNTDCSTWNNSKEKLCYDCNSCKGGVLANIRNQWRRLTVFNACVLVLVTAIYALGCYAIKNNRSDSHCNHRKPPIP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00790 274 Pfam Tetraspanin family 6 251 IPR018499 GO:0016021
Gma17g00790 274 PANTHER TETRASPANIN-8-RELATED 1 267 IPR044991 GO:0009734|GO:0016021
Gma17g00790 274 PANTHER TETRASPANIN-8 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00790 Gma-Chr17 6652555 6653932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00790 1 262 Miscellaneous Gene Families AT1G18520 46.816 5.40e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00790 - - gmx:100815322 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00790 17 6652555 6653932 Gma17g00790 17 6652555 6653932 ECH
Gma17g00790 17 6652555 6653932 Gma05g00152 05 1486696 1488229 GST