Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00789 ATGGCTATTGTAAGATTGATGAAGACAAGCAACAAGAAACGACACACTTATAATAATGGATCTTCTACGTCTCCTATAAAATCACTTCCAAAAGATTTGTTGGTAGAGGTGGTTGCAAGGGTAGCCTCTGATTCCATCGTTGATCTTCGCAATATGAAACAATGTTGCAAGGATTTTCTTGATGCTTCGGAAGATAATTACGTGTGGCAGCAAGTTTCTTTAGACAAGTTCCCATTAATGCGATGGCTTCCTAATGACAAAGCATCGTGCTTCTTAAAATGTTGTAGGGAGAGTGGAAATATTGAAAGTTTGTATAGAGAAGGATTGCTGAAATTCTTTAATTACCCAAACGGAAACATTAATGGTCTCGGAGACTTGAAAACGGCTGCTCTAAAGGGTCACATCGAAGCAAAATATGTATACGttctcaacattgtcgacgatgtgctcgacgaagctttcaatttcttctaccaggacgcatccacgaagctcaacatcgaaggcacccaaaggtcccaggatctgaaaaagGGTGTTGATTGCGTTCGGCTGAATGTTCAATCTGTTTTGGACAAACAACTTGCTGCTTGGGAGAGTTACATCCTCCGTCACTGTTTTGCTCTTCCCCAAGGTTTTCGTATGCCAAACACCGATGAATCAAATGAGAATGCCCTAGATCCAGGTGCTCCTTTTGATCCAGATATAGATGCCCAGTTAGATTCATTGAGAGAAAAACTAATTGAGGTGGGGAAGGAGTCTGAAATGCTTAATCAAGAAATGCAAGCATTAGAAAGAAAGTCTGCTGTCAATGTGGCTGGACATATCAATGAAGCTGTACAATTATATGAGCAAAATTCTATGCATGAGGTGTTTCAGGAGATTGTGACGACCGCCTCAGAACTTGGAGCAAAGATGGCAAAGCTAAACTCTAGCATGATTGAAGAGACTGACCAAACAAAAACTAAAAGGATTTACAGCACAGAAATGGATCTATCTGCTATAAATCCTGCTAAAGGCCTGTCAAACATGAAGTTAGACGATGTTGAAGAATTTGTAAGTGTTATGAAGAGTATGTGA 1080 0.3546 MAIVRLMKTSNKKRHTYNNGSSTSPIKSLPKDLLVEVVARVASDSIVDLRNMKQCCKDFLDASEDNYVWQQVSLDKFPLMRWLPNDKASCFLKCCRESGNIESLYREGLLKFFNYPNGNINGLGDLKTAALKGHIEAKYVYVLNIVDDVLDEAFNFFYQDASTKLNIEGTQRSQDLKKGVDCVRLNVQSVLDKQLAAWESYILRHCFALPQGFRMPNTDESNENALDPGAPFDPDIDAQLDSLREKLIEVGKESEMLNQEMQALERKSAVNVAGHINEAVQLYEQNSMHEVFQEIVTTASELGAKMAKLNSSMIEETDQTKTKRIYSTEMDLSAINPAKGLSNMKLDDVEEFVSVMKSM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00789 359 SUPERFAMILY F-box domain 13 83 IPR036047 GO:0005515
Gma17g00789 359 ProSiteProfiles F-box domain profile. 23 72 IPR001810 GO:0005515
Gma17g00789 359 Pfam Mis12 protein 142 258 IPR008685 GO:0000278|GO:0000775|GO:0005634
Gma17g00789 359 Coils Coil 240 267 - -
Gma17g00789 359 PANTHER PROTEIN MIS12 HOMOLOG 142 358 IPR008685 GO:0000278|GO:0000775|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00789 Gma-Chr17 6641581 6646818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00789 - - gmx:100306256 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00789 17 6641581 6646818 Gma17g00789 17 6641581 6646818 ECH