Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00774 ATGTGCAGGGCAGAGTGGGAAGGTTTGATGGGTCTGAAGAAGTGGGAGAGTAAGGTTCAGAAAGTGGGAATGGGTGTGTTAGGTTCGGGGGGTTCAGGTTCAGGTTCGGGTTCGGGTTCGTCGCGGTCGAGAATGAAGATGTGGATGATACGGGCAACCACATCGGTGTTATTGTGGACCTGCATCGTTCAGTTAACGGCGTTGGGTGACATGTGGGGGCCGAGAGTTTTGAAAGGTTGGCCTTCTTGTTTCACTCACGAGTCTGCCGTTAGAGCAATGGATGTCGAGTTACCGTCACAGCGTCCACCTCTTCTCCCTCCCAAGAGGGTTTATAAAAACAATGGATACCTTATGGTTTCGTGCAATGGAGGACTCAACCAAATGAGAGCTGCGATATGTGACATGGTGGCTATTGCCAGATATTTAAATGTCACGCTTATAGTTCCTGAACTGGATAAAACATCCTTTTGGGCTGATCCCAGTGACTTTCAAGACATATTTGATGTGGATCATTTTATCGCGTCCTTGAGAGATGAAGTGCGGATATTGAAAGAGTTGCCTCCCAGACTCAAGATGAAAGTGGAACGCGGCTTTCTTTACACCATGCCACCTATTAGTTGGTCTGATATATCTTACTATAAGGACCAGATTCTACCCTTGATACAAAAGTACAAAGTTGTTCACTTAAATAGAACTGATGCTCGGTTGGCCAATAATGGTCAACCGATAGAGATTCAGAAGCTGCGTTGCCGGGTCAATTTTAGTGGTCTGAGATTTACTTCCCAGATAGAGGAGTTGGGCAGAAAGGTGATCAGGCTTCTAAGGCAAAAAGGTCAATTTCTTGTGCTCCACCTTAGGTATGAGATGGACATGTTGGCATTTTCTGGCTGCACTCAAGGTTGTAACAGTGATGAGGTGGATGAATTGACAAGAATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAAAGAAAAGATGGTTTATGCCCTCTAACACCTGAGGAGACCGCCCTTACACTTAAGGCTCTTGACATTGATCAGAACATTCAAATCTACATTGCAGCAGGGGAAATATATGGAGGGGAAAGGAGAATGGCAGGTCTTGCAAAGGAGTACCCAAAATTGGTCAGGAAGGAAACGCTGTTGGAGCCATCTGACCTTCGTTTCTTCCAAAATCATTCATCCCAGATGGCAGCATTGGATTATCTTGTCTCGTTAGAGAGTGATATTTTTGTTCCCACATATGATGGAAATATGGCCAAAGTGGTTGAGGGCCACCGCAGATATCTTGGGTTCAAGAGAACGATTTTATTGAACAGAAAGCTCCTAGTTGAATTGATAGATCAGTACAATAATGGAGTGCTAAACTGGGATGAATTCTCTTCAGCGGTGAAGGAAGCTCATGCCGATCGCATGGGTAGCCAAACAAAGAGGTTTGTAATCCCTGAGAGGCCAAAAGAAGAGGATTATTTCTATGCCAACCCACAGGAGTGTTTGGAACAATCAGCAGATGAACCGTTGGCGTTGAGTAGTAGTACGTGA 1560 0.4455 MCRAEWEGLMGLKKWESKVQKVGMGVLGSGGSGSGSGSGSSRSRMKMWMIRATTSVLLWTCIVQLTALGDMWGPRVLKGWPSCFTHESAVRAMDVELPSQRPPLLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSDFQDIFDVDHFIASLRDEVRILKELPPRLKMKVERGFLYTMPPISWSDISYYKDQILPLIQKYKVVHLNRTDARLANNGQPIEIQKLRCRVNFSGLRFTSQIEELGRKVIRLLRQKGQFLVLHLRYEMDMLAFSGCTQGCNSDEVDELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLKALDIDQNIQIYIAAGEIYGGERRMAGLAKEYPKLVRKETLLEPSDLRFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKRTILLNRKLLVELIDQYNNGVLNWDEFSSAVKEAHADRMGSQTKRFVIPERPKEEDYFYANPQECLEQSADEPLALSSST 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00774 519 PANTHER OS02G0726500 PROTEIN-RELATED 33 510 - -
Gma17g00774 519 CDD O-FucT_plant 116 441 IPR024709 -
Gma17g00774 519 Pfam GDP-fucose protein O-fucosyltransferase 116 436 IPR019378 -
Gma17g00774 519 PIRSF UCP009360 35 502 IPR024709 -
Gma17g00774 519 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 33 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00774 Gma-Chr17 6513969 6517301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00774 112 505 Miscellaneous Gene Families AT2G37980 49.622 5.94e-131 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00774 K23280 - gmx:100814267 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00774 17 6513969 6517301 Gma17g00774 17 6513969 6517301 ECH