Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00773 ATGGAGCTGTGGAACAGAGCCCGAGGCTTTGCGGAAGAAGCAGCGAAACGATCACAGTACTTGCCCCAACCTTCTATCATAAACGGCGTCTATCTCCACCGTTTTGGCATCACCCAAGAGTTGAGGGAGTTCGTCGAAGGAATTACCATCACTACCTTTGAGGATTTTCCCCTTCAAGATGATACGGAATTGTCTGATGTTCCTGCAGTTTCAAATGTTAGGCAGGATCTAACCGAGTGGCAGGAAAAACATGCCAGGCTTGTTCTTTCTACAGTCAAGGAGATTTCAAGATTGAGGTATGAACCGTGTCCACAAGTCATGAAAGAGAGGAAGTTTTGGAGAATATACTTTATACTTGTGAATAATCACATTGCACCATGA 381 0.4462 MELWNRARGFAEEAAKRSQYLPQPSIINGVYLHRFGITQELREFVEGITITTFEDFPLQDDTELSDVPAVSNVRQDLTEWQEKHARLVLSTVKEISRLRYEPCPQVMKERKFWRIYFILVNNHIAP 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00773 126 PANTHER BSD DOMAIN PROTEIN 1 23 - -
Gma17g00773 126 PANTHER BSD DOMAIN PROTEIN 32 126 - -
Gma17g00773 126 SUPERFAMILY BSD domain-like 36 123 IPR035925 -
Gma17g00773 126 Pfam BSD domain 79 124 IPR005607 -
Gma17g00773 126 Gene3D BSD domain 51 125 IPR035925 -
Gma17g00773 126 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 23 - -
Gma17g00773 126 PANTHER BSD DOMAIN-CONTAINING PROTEIN 32 126 - -
Gma17g00773 126 ProSiteProfiles BSD domain profile. 72 124 IPR005607 -
Gma17g00773 126 SMART wurzfinal6 72 124 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00773 Gma-Chr17 6501787 6505146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00773 32 126 EF-hand Containing Proteins AT1G69030 63.918 4.81e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00773 - - gmx:100527562 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00773 17 6501787 6505146 Gma17g00773 17 6501787 6505146 ECH
Gma17g00773 17 6501787 6505146 Gma05g00171 05 1621777 1627387 GST