Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00576 ATGAGTAACGAAAAGGCTCCTTCATCAGCTTCTTCGAGTAGCTACGAGTTGAGCAAAGGCATCAATGGCCTCGACAAGGTTATTCTTCGCGACGCACGTGGTAGCTCCGCTGAGGTGTACTTGTACGGTGCTCACGTGACTTCATGGAAGAATGACCATGCCGAGGAATTGCTTTTTCTCAGTAGTAAGGCTATCTTTAAGCCTCCAAAGCCAATTCGTGGAGGGATTCCAATATGTTTTCCTCAATTTTCAAACCTCGGTCCTCTCGACTCACATGGATTTGCTAGAAACCAATTCTGGACAATTGATGATTCCCCTCCTCCTTTTCCAACAAGTACTTCGAATAAAGCCTTTGTTGATTTGATTCTTAAACCCTCAGAAGACGACATCAAGATTTGGCCTCACAGTTTTGAATTTCGTCTTAGGGTAGCTCTTGGACCTGGAGGAGATCTGTTGATGACATCTCGGATCAGGAACACTAACATTGATGGGAAGCCATTTTCATTCACATTTGCTTATCATACATATTTCTCTGTGTCAGATATAAGGCAAGTGCTTGAAATGCGGGTTGAAGGATTAGAGACATTGGATTATCTTGACAACTTGCAGAAAAGGGAACGCTTTACTGAACAGGGGGATGCTTTAACATTTGAATCAGAATTTGACAGGATATATCTCAGCACTCCTACAAAGATTGCAATTCTTGATCATGAGAAAAAGAGAACAATTGTATTGCGTAAAGATGGTCTTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCTATATCTGATTTCGGTGATGATGAGTATAAGTACATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAGCCTATCACTTTGAAACCTGTGGACAGCTTGATCCCAAAAGAGTTATTCAAGGAAGCTGAAAGATCATCGTTGTGTTTTGTGTCCTGTACAGGTAGCTTGTTGCCACCACGATGA 975 0.4226 MSNEKAPSSASSSSYELSKGINGLDKVILRDARGSSAEVYLYGAHVTSWKNDHAEELLFLSSKAIFKPPKPIRGGIPICFPQFSNLGPLDSHGFARNQFWTIDDSPPPFPTSTSNKAFVDLILKPSEDDIKIWPHSFEFRLRVALGPGGDLLMTSRIRNTNIDGKPFSFTFAYHTYFSVSDIRQVLEMRVEGLETLDYLDNLQKRERFTEQGDALTFESEFDRIYLSTPTKIAILDHEKKRTIVLRKDGLPDAVVWNPWDKKAKAISDFGDDEYKYMLCVEAAAIEKPITLKPVDSLIPKELFKEAERSSLCFVSCTGSLLPPR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00576 324 PIRSF PHexose_mutarotase 7 311 IPR025532 -
Gma17g00576 324 SUPERFAMILY Galactose mutarotase-like 21 293 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gma17g00576 324 Pfam Aldose 1-epimerase 26 293 IPR008183 GO:0005975|GO:0016853
Gma17g00576 324 Gene3D - 3 303 IPR014718 GO:0030246
Gma17g00576 324 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 13 296 - -
Gma17g00576 324 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 13 296 - -
Gma17g00576 324 CDD D-hex-6-P-epi_like 27 293 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00576 Gma-Chr17 4769123 4776183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00576 K01792 - gmx:100801977 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00576 17 4769123 4776183 Gma17g00576 17 4769123 4776183 ECH
Gma17g00576 17 4769123 4776183 Gma13g00789 13 22151334 22158918 GST
Gma17g00576 17 4769123 4776183 Gma15g01522 15 14216412 14223478 PCT
Gma17g00576 17 4769123 4776183 Gma09g00514 09 5291216 5297619 PCT
Gma15g01522 15 14216412 14223478 Gma17g00576 17 4769123 4776183 PCT
Gma09g00514 09 5291216 5297619 Gma17g00576 17 4769123 4776183 PCT