Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00565 ATGGGGGCTTGTTTTTCATGTAACTCATCCTCCACATTGAAGAATATCCGTGTGGTTCATCTCAATGGTTATGTAGAGGATTTTGATCAACCAATTTCAGTGAGGCAAGTAATTGGATACCCCAAAAAACACTTTGTTTGCACTTCCACTCAGCTTCTTTCCCCATGCTCAACATCAATGAATGGAGACACCAACCTCCAACCTGGTCAAGTGTATTTCATGCTACCATACTCGGTACTACAAGCCGATGTTTCGCCGGTGGAACTGGCTGGCCTTGCAAAGAGACTCACCACAATAGCCAAATCAGGTCCTTTGTCAAGCCAAACCCAAACATTTTGGAATTCACCCTCCAGGAGTCCTGGTGGAGTTGGGGTGGCAGAGAAATATGGTGTTGGTTTGATGAATATTGGAGGAAGAAGCCCTAGTAAAGTGCAACCTTGGAAACCTATCTTGGACACCATAACAGAGAAGCCATTCCATAAGAGAAGTGAATCGGATTTGCAAGAAAGTTAA 513 0.4405 MGACFSCNSSSTLKNIRVVHLNGYVEDFDQPISVRQVIGYPKKHFVCTSTQLLSPCSTSMNGDTNLQPGQVYFMLPYSVLQADVSPVELAGLAKRLTTIAKSGPLSSQTQTFWNSPSRSPGGVGVAEKYGVGLMNIGGRSPSKVQPWKPILDTITEKPFHKRSESDLQES 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00565 170 Pfam PADRE domain 1 156 IPR025322 -
Gma17g00565 170 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 167 - -
Gma17g00565 170 PANTHER OS06G0700300 PROTEIN 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00565 Gma-Chr17 4663954 4664866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00565 - - gmx:100775396 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00565 17 4663954 4664866 Gma17g00565 17 4663954 4664866 ECH
Gma17g00565 17 4663954 4664866 Gma13g00801 13 22319720 22320634 GST
Gma17g00565 17 4663954 4664866 Gma15g01535 15 14462510 14463629 PCT
Gma17g00565 17 4663954 4664866 Gma09g00532 09 5521202 5521747 PCT
Gma15g01535 15 14462510 14463629 Gma17g00565 17 4663954 4664866 PCT
Gma09g00532 09 5521202 5521747 Gma17g00565 17 4663954 4664866 PCT