Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00541 ATGTTCAATTTCTTACTAAGGAAAGACGTTCGAAAGATTCTCAAGCGCAAAGATAGCGATGCTGGAGAAAAAGGAAGAGCACTGGAAGACTTGAGAGGTTCTCTGTTTAATGAATTTCGTTCCTCTGAAGGTGCAAAACGTCAACAACAGCGTACATGTGGTCCAGCTGCAGCACTTTCCTTCAATTTTTTTATTGCAATTAGTATTATCTTCATAAACAAAATGGTTCTTCAAACTGTTAAATTCAAATTCCCCATACTTCTCTCACTAATTCACTATATAGTGAGCTGGCTCTTAATGGCTGTACTAAATGCATTTTCTTTACTTCCTGCATCTCCCTCAAAATCAACTAAGCTATCTGCTTTATTTACTCTTGGATTTGTTATGTCTCTATCTACTGGCCTTGCTAATGTCAGCTTGAAGTATAATAGCATTGGCTTCTATCAGATGGCAAAGATTGCAGTAACACCTTCAATAGTTATGGCAGAATTTGTATTGTACAAGAAGAAAGTTTCTTGGCCCAAGGCTTTAGCATTAACGGTGGTATCTATTGGTGTTGCTGTGGCTACAGTGACGGATTTGCAGTTCCATTTCTTTGGTGCCTGTGTAGCATTAGCATGGATTGTACCTAGTGCTGTAAACAAAATCCTCTGGTCCAGACTGCAGCAGCAAGAGAACTGGACAGCTTTGGCGTTGATGTGGAAAACAACACCTATTACTTTAATTTTTCTGGCTGCTATGTTACCCTGCTTAGACCCTCCTGGTGTACTTTCCTTTGATTGGAACTTCATTAACACATTGGTGATACTCACATCAGCCATTCTTGGATTTTTGCTTCAGTGGTCTGGTGCTTTAGCACTAGGTGCTACATCTGCCGTCTCGCATGTTGTTCTTGGGCAGTTTAAGACATGCATTATCCTCCTGGGAAACTATTATCTCTTTGGATCCAATCCAGGCATAATCAGTATCTGTGGGGCATTTACAGCTATTGCTGGTATGTCCGTTTACACTTACCTTAATCTGAAGCAGCAATCAAACAAGATATTTCCTCGACAGGCCACCCTTTTACCAAAATCTAAACTAAGCAAAGAAAATGGAACTTCCCAAAATGGACACTACAGTGCTGAAAATGTCTAA 1137 0.4002 MFNFLLRKDVRKILKRKDSDAGEKGRALEDLRGSLFNEFRSSEGAKRQQQRTCGPAAALSFNFFIAISIIFINKMVLQTVKFKFPILLSLIHYIVSWLLMAVLNAFSLLPASPSKSTKLSALFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVMAEFVLYKKKVSWPKALALTVVSIGVAVATVTDLQFHFFGACVALAWIVPSAVNKILWSRLQQQENWTALALMWKTTPITLIFLAAMLPCLDPPGVLSFDWNFINTLVILTSAILGFLLQWSGALALGATSAVSHVVLGQFKTCIILLGNYYLFGSNPGIISICGAFTAIAGMSVYTYLNLKQQSNKIFPRQATLLPKSKLSKENGTSQNGHYSAENV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00541 378 Pfam Triose-phosphate Transporter family 62 336 IPR004853 -
Gma17g00541 378 PANTHER SOLUTE CARRIER FAMILY 35 15 355 - -
Gma17g00541 378 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 15 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00541 Gma-Chr17 4442438 4447198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00541 67 362 Organic Solute Cotransporters AT1G77610 25.325 2.68e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00541 - - gmx:100777883 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00541 17 4442438 4447198 Gma17g00541 17 4442438 4447198 ECH
Gma17g00541 17 4442438 4447198 Gma13g00820 13 22510242 22511174 GST
Gma17g00541 17 4442438 4447198 Gma15g01565 15 15094563 15104280 PCT
Gma17g00541 17 4442438 4447198 Gma09g00557 09 5968298 5972638 PCT
Gma15g01565 15 15094563 15104280 Gma17g00541 17 4442438 4447198 PCT
Gma09g00557 09 5968298 5972638 Gma17g00541 17 4442438 4447198 PCT