Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00453 atggaagatgacaatgggaaccaaaacgcctcgccacctcaaaacggagggtttctcatcccggatatatttactttaactataccgcagattgatggaggttccaatttgtcgatcaaagttcggtggtcTCAGAAAATAGTGTTCTCCAAAGGCCAGTTCTCTTTGAATGTGCCGTTTACCTTTCCTGATTTCGTTAACCCTGCGGGGAAGAAAATATCTAAAAGAGAAAAGATACAAATTAATGTGGATGCTGTTACTGGAGGTGAGCTTCTGTGCAAGACATTAAGCCACCCACTGAAGGAAGTGAGGCGTCATGTTGGGAGCATGGGCTTCTTATATGATTCCGATGTTCTTTCATGGTCTAAAGTTGATTTTAGCTTTTCATATGCTGTTTCTTCAAGTCATATAACTGGTGGTGTTCTTTTGGAATCTGCATCTGTGCATGATTTTGATCAAAGAGAGATGTTCTACATGTATCTTTCTACAGGAGATATTCAGAGTGACAAGGTATTCAAAAAGGACATAATATTCATTATTGACATCAGCGGTAGTATGCGGGGAAAGCTAATTGAAGACACAAAGAATGCACTATTGACTGCTCTCTCTAAGCTTAATCAGGCTGATTCATTTAATATTATAGCCTTTAATGGAGAGACTTATCTATTTTCCAAAACGATGGAATTGGCTTCCGGGGATGCTGTTGAAAGGGCCACTGAGTGGATTAACACGAACTTTGTTGCTGGGGGTGGTACAAATATTTCTCATCCATTAAACACGGCAATAGAGATGCTATCCAATATTCAAAGTTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAAAGACAAATTTGTGCTATGGTAAAGAATCGTATGATCAATGGAGAGTCAATATGCCCTCGAATTTACACTTTTGGCATTGGTTCGTTCTGCAATCATTATTTCTTGCGAATGCTCGCAATGATTGGTAGGGGCCAATATGATGCTGCGTTGGATGTAGATTTGATTGAACCTCGAATGCTGACATTGTTTGGCAAAGCTTCATCTCTCATTCTTGCAAATATCAAAATGGACACATTGGATGATCTTGATGACCTCGAGGTATACCCTCCTCATATTCCAGATCTTTCATCAGAGGGTCCATTGATTTTATCTGGGAGATACAGGGGAAATTTTCCCAAAACTCTTAAAATCGAAGGTATCTTGGCTGATTTCAGTAATTTTGTAGTAGATATGAAGATACAAAATGCTAAGGACATTCCTGTGCAAAAGATTTCTGCAAGAGATCAAATAGAGCATCTTACTGCCCAAGCATGGCTCATGGAAAATAAACAACTAGAACAGAAGGTTGCAAAATTGAGCTTGCAGACTGGCTTTATGTCTGAGTATACACGAATGATAATACTTGAGACTGATCATCTAAAGAAAGTCAAGGAATCAGCCGGAACGAAAGAAGCGTCAAAAAAGAGCCATCCTCAGTATGAGGCACCCGTCCAAGGCCAGAGAATGATTTTACTACCCCATTTGGGTATTGGCTTTGGCAACTTAACTGCAACTGCTGAAAATACTCCTCCAGGATTTGAATCAAAATTTCCTGAAGTGCCGGAAATCTTTAAGGCGGCCACAAATTGTTGTGAAACCTTGTGCAGTTACTGTTGTTGCATGTGCTGCATCCAGTGTTGTACCCGGATAAACAACCAATGTGCAACTGCATTGACACAACTCTGCATTGGTCTAGGATGCTTCGGCTGCATCACATGTTGTTCAGATATATGCTGTTCTGGAAACGAAGGCTGA 1812 0.3709 MEDDNGNQNASPPQNGGFLIPDIFTLTIPQIDGGSNLSIKVRWSQKIVFSKGQFSLNVPFTFPDFVNPAGKKISKREKIQINVDAVTGGELLCKTLSHPLKEVRRHVGSMGFLYDSDVLSWSKVDFSFSYAVSSSHITGGVLLESASVHDFDQREMFYMYLSTGDIQSDKVFKKDIIFIIDISGSMRGKLIEDTKNALLTALSKLNQADSFNIIAFNGETYLFSKTMELASGDAVERATEWINTNFVAGGGTNISHPLNTAIEMLSNIQSSVPIIFLVTDGTVEDERQICAMVKNRMINGESICPRIYTFGIGSFCNHYFLRMLAMIGRGQYDAALDVDLIEPRMLTLFGKASSLILANIKMDTLDDLDDLEVYPPHIPDLSSEGPLILSGRYRGNFPKTLKIEGILADFSNFVVDMKIQNAKDIPVQKISARDQIEHLTAQAWLMENKQLEQKVAKLSLQTGFMSEYTRMIILETDHLKKVKESAGTKEASKKSHPQYEAPVQGQRMILLPHLGIGFGNLTATAENTPPGFESKFPEVPEIFKAATNCCETLCSYCCCMCCIQCCTRINNQCATALTQLCIGLGCFGCITCCSDICCSGNEG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00453 603 Coils Coil 441 461 - -
Gma17g00453 603 Pfam von Willebrand factor type A domain 174 332 IPR002035 -
Gma17g00453 603 SMART VWA_4 173 353 IPR002035 -
Gma17g00453 603 ProSiteProfiles VWFA domain profile. 175 368 IPR002035 -
Gma17g00453 603 Gene3D von Willebrand factor, type A domain 174 349 IPR036465 -
Gma17g00453 603 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 602 - -
Gma17g00453 603 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 602 - -
Gma17g00453 603 SUPERFAMILY vWA-like 174 337 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00453 Gma-Chr17 3714101 3719650 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00453 - - gmx:100777542 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00453 17 3714101 3719650 Gma17g00453 17 3714101 3719650 ECH
Gma17g00453 17 3714101 3719650 Gma13g00915 13 23312206 23317901 GST
Gma17g00453 17 3714101 3719650 Gma15g01671 15 17371968 17380312 PCT
Gma17g00453 17 3714101 3719650 Gma09g00647 09 7375806 7381922 PCT
Gma15g01671 15 17371968 17380312 Gma17g00453 17 3714101 3719650 PCT
Gma09g00647 09 7375806 7381922 Gma17g00453 17 3714101 3719650 PCT