Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00447 ATGTTGGGGAAGAGGCCCCGGCCAATGATCGGAAAGTTGTCGGAGTTGTTGGTCTCGAGAGGCCGCACGGTGGCATATTTGGACACCACCGGAAGCCCTAGAGGCCCATTAGACATGAAGATGATGCAATCATCACCAAGAGGCTTAAAAAACTATGATCTTGGTGGTGTTGGTCTTGGAATTGTAGTGGCTCTTGATAAATCCAACGAGGTTGCTGCACGTGAAGTTTTGCCCAAACACGCCGTTTGCACCTCCAATTTGAACCGGTCCGGCCCAATCCCGGTTCACTACACCAAAAACCCAGATGAATTTGATGTGGAGGAATACACCTATGTGACATGCCACGTACCTAACAAAACGTTCACTAAGGTATACTATGATGGTGGTGAAGGTGAAATTCGGAGACATTACAACAACAGCAACGTTGGAGTTCTCAGAAGAACCGCACCACAACCTTTGATTGTTGAGGCCGAATCATTGTACCCCACATCGAATTTTCTCAGTTCATGTCACTTATGCGGAAAGAAACTCCACGGCAAAGACATATACATGTACAGAGGAGAGAAAGCGTTTTGTAGCCCAGAGTGTCGTTCGAGTCAAATAATGATGGACGAACGGAAGGAACGGTGTAGGTCAGAAGCTTCAAGGTCTGTGGAAATGTCAAGCTCGCCATATGCAAGGGAACAGATATTTTCAACTGGGATTCTTGCGCTTTAG 717 0.4686 MLGKRPRPMIGKLSELLVSRGRTVAYLDTTGSPRGPLDMKMMQSSPRGLKNYDLGGVGLGIVVALDKSNEVAAREVLPKHAVCTSNLNRSGPIPVHYTKNPDEFDVEEYTYVTCHVPNKTFTKVYYDGGEGEIRRHYNNSNVGVLRRTAPQPLIVEAESLYPTSNFLSSCHLCGKKLHGKDIYMYRGEKAFCSPECRSSQIMMDERKERCRSEASRSVEMSSSPYAREQIFSTGILAL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00447 238 Pfam zinc-finger of the FCS-type, C2-C2 159 207 IPR007650 -
Gma17g00447 238 ProSiteProfiles Zinc finger FLZ-type profile. 165 208 IPR007650 -
Gma17g00447 238 PANTHER FCS-LIKE ZINC FINGER 12 1 237 - -
Gma17g00447 238 PANTHER OS02G0174800 PROTEIN 1 237 IPR044604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00447 Gma-Chr17 3671300 3672667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00447 - - gmx:100816402 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00447 17 3671300 3672667 Gma17g00447 17 3671300 3672667 ECH
Gma17g00447 17 3671300 3672667 Gma13g00922 13 23366170 23367706 GST
Gma17g00447 17 3671300 3672667 Gma15g01681 15 17617539 17618656 PCT
Gma17g00447 17 3671300 3672667 Gma09g00656 09 7533184 7534558 PCT
Gma15g01681 15 17617539 17618656 Gma17g00447 17 3671300 3672667 PCT
Gma09g00656 09 7533184 7534558 Gma17g00447 17 3671300 3672667 PCT