Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00429 ATGGCCACTGATCGTTTGACCCGGGTTCACAGTCTCCGTGAGAGGCTTGATGAAACCCTCACTGCCAACAGGAACGAAATTTTGGCCCTTCTGTCAAGGATCGAAGCTAAGGGCAAGGGGATCCTGCAACACCACCAGGTCATTGCTGAGTTTGAGGAAATCCCTGAGGAGAACAGGCAGAAGCTTACTGATGGTGCCTTTGGAGAAGTCTTGAGATCTACACAGgaagccatagttttgccaccatgggttgctctggctgttcgtccaaggcctggtgtgtgggagtacctgaaagtgaatgtgcacgctcttgttgttgaggagttgcaacctgctgagtaccttcacttcaaggaagaacttgttgatggaagTTCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTCAATGCAGCCTTCCCTCGCCCAACTCTTAACAAGTCAATTGGAAATGGTGTGCAGTTCCTCAACCGCCACCTTTCTGCCAAACTCTTCCACGACAAGGAGAGCTTGCACCCACTTTTGGAATTCCTCAGGCTTCACAGCGTCAAGGGAAAGACTTTGATGTTGAATGACAGAATTCAAAACCCAGATGCACTCCAACATGTTCTGAGGAAAGCTGAGGAGTATCTGGGCACAGTGCCTCCtgaaactccctactcagaatttgagcacaagttccaggagattggtttggagagagggtggggtgacaacgcagagcgtgttcttgagtcaattcaacttctcttggatcttcttgaggcccctgacccttgcacccttgagactttccttggaagaattcctatggtcttcaatgttgtcattctttctccccatggttactttgcccaagataatgtcttgggataccctgacactggtggccaggttgtttacatcttggatcaagttcgtgctttggagaacgagatgctccatcgcattaagcaacaaggattggacattgtacctcgtattctcattATCACCCGTCTTCTCCCCGATGCAATCGGAACTACTTGTGGCCAACGTCTTGAGAAGGTGTTCGGAACCGAGCACTCCCACATTCTTCGAGTTCCCTTTAGAACTGAGAAGGGAATTGTTCGTCAGTGGATCTCAAGATTCGAAGTCTGGCCATACTTGGAAACTTACACTGAGGAtgttgctcatgagcttgccaaagagttgcaaggcaagccagatctgattgtcggaaactacagtgatggaaacattgttgcctctttgttggcacataaattaggagtcactcagtgtaccattgctcatgcacttgagaagaccaaataccccgaatccgacatttactggaaaaaattggaagagagataccacttctcttgccaattcacagctgatctatttgccatgaaccacacagatttcattatcaccagtaccttccaggagattgctggaaGCaaggacactgttggacagtatgagtctcacacagcctttacccttcctggactctaccgtgttgtgcacggcattgatgtctttgatccaaaattcaacattgtctcccctggagctgatCAAACCATTTACTTCCCCCCCACCGAAACTAGCCGTAGGTTGACCTCCTTCCACCCCGAAATCGAAGAACTTCTTTACAGCTCTGTGGAGAATGAAGAACACATATGCGTGCTGAAGGACCGCAGCaagccgattatcttcaccatggcaaggttggaccgtgtgaagaacatcacaggactcgtggagtggtacggtaagaacgcgaagctgagggagttggtgaaccttgtggttgttgccggagacaggaggaaggagtcgaaggacttggaagagaaggccgagatgaagaagatgtacggcctgatcgagacctacaagttgaacgggcaattcagatggatttcatctcagatgaaccgtgtgaggaacggagagctgtaccgTGTGATCTGCGACACCAAGGGAGCTTTCGTGCAGCCGGCTATATACGAGGCTTTTGGTTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTCGCCACATGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGCAAGTCTGGCTTCCACATTGACCCTTACCATGGTGACCGTGCTGCTGATCTCCTTGTTGACTTCTTTGAGAAGTGCAAGCTTGACCCAACCCACTGGGAAACAATCTCAAAGGCTGGTCTCCAGCGTATTGAAGAGAAGTACACATGGCAAATTTACTCACAGAGGCTTCTCACTCTCACTGGTGTCTATGGCTTCTGGAAGCATGTGTCTAACCTTGACCGCCGTGAGAGCCGCCGCTATCTCGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCCGAGTCTGTGCCCCTTGCTGTTGAGTAA 2418 0.2601 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLKVNVHALVVEELQPAEYLHFKEELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLERGWGDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAIGTTCGQRLEKVFGTEHSHILRVPFRTEKGIVRQWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPPTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWETISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00429 805 Gene3D - 146 275 - -
Gma17g00429 805 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Gma17g00429 805 Gene3D Glycogen Phosphorylase B; 280 796 - -
Gma17g00429 805 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Gma17g00429 805 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Gma17g00429 805 PANTHER SUCROSE SYNTHASE 1 805 - -
Gma17g00429 805 Gene3D - 25 145 - -
Gma17g00429 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Gma17g00429 805 Gene3D Glycogen Phosphorylase B; 527 753 - -
Gma17g00429 805 Pfam Glycosyl transferases group 1 564 736 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00429 Gma-Chr17 3462742 3468761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00429 6 805 Glycosyltransferase AT3G43190 85.250 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00429 K00695 - gmx:100788584 1624.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00429 17 3462742 3468761 Gma17g00429 17 3462742 3468761 ECH
Gma17g00429 17 3462742 3468761 Gma13g00941 13 23578853 23586434 GST
Gma17g00429 17 3462742 3468761 Gma15g01704 15 18227906 18232840 PCT
Gma17g00429 17 3462742 3468761 Gma09g00676 09 7917058 7923299 PCT
Gma15g01704 15 18227906 18232840 Gma17g00429 17 3462742 3468761 PCT
Gma09g00676 09 7917058 7923299 Gma17g00429 17 3462742 3468761 PCT