Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00387 ATGAAGCAAAAAACGCCTTCTTCACCAACCACTGCAAGAAATGCGTCGAAGATGCAAGGTGACAAGTCCCTGCAGAGTCCTCCACCACCACCACCACCACGCCTCAGAGCTTCTTCTAAGGCTCCGAAGTCACCGCCAGAGATTGTAAATAGGGAATCCATTTCATCAACCAGAGCTAAATCAGTGCCTCCAGACTTGAAGAACGTTTCAAGGGCCAAAAGGGGTGTTGTGGTGAACAAGCCTAAGTTGAATGAAGAGGCTAAGGTTGTTGTTGTTGCTAGGCCACGGCGGAGGGTTGGGGATTTTGATCTGCAAAAGAATGAAGACGATGATCCTGATGGGAAGAAGAAGAAGGAGTTGCAGGAGAAGCTAGAGGTGAGTGAGAATTTGATCAAGAGTTTGCAATCTGAGGTGCTTGCATTGAGGGAGGAATTGGATAGAGTTAAGAGCTTGAATGTGGAGCTTGAGTCTCGGAACACAAAGCTCACTCAGAATCTTGCTGCTGCTGAAGCTAAGATATCAACTGTTGACATTGGCAACAATGGAAAGAAGGGGCCAATTGGAGAACACCAGAGTCCCAAATTTAAAGATATACAGAAACTCATTGCTGAAAAATTGGAACGGTCTAGAGTGAAAAAGGAAGGTACTCCTGAAATAATTTTTGCTAAAGCATCAATCTCAGCTCCAACACCAAGTTATGCCATTCCTGAAACTACAAGTATAGGAAGAAAATCTCCACCCAATACATGCCTGCAGCCACCGCCACCAGTTACTAGTGTAGGAAGAAAATCTCCATCCAACACATGCCTGCAGCCACCTCCACCACCGCCAATTCCGACTCGGCCTTTGGCAAGATTAGCCAATTCCCAAAAGTCCCCTGCAATTGTTGAACTATTTCACTCCTTAAAGAATAAGGATTGGAAGATAGACTCAAAAGGATCAGTGAATCATCAGAGACCAGTAGTTATTAGTGCACACAGTAGCATTGTTGGAGAAATTCAGAACCGTTCAGCTCATCTTTTAGCAATAAGGGCAGACATTGAAACAAAAGGAGAATTCATTAATGACCTTATAAGAAAAGTAGTAGATGCAGCCTTCACGGATATTGAAGAGGTCCTAAAGTTTGTTGATTGGCTTGATGTCAAATTATCATCATTGGCTGATGAGCGTGCCGTCTTGAAGCCTTTTAAGTGGCCTGAGAAGAAAGCTGATGCAATGAGAGAGGCTGCAGTTGAGTATCATGAGCTTAAAATGCTAGAACAAGAGATTTCCTCCTACAAGGATGACCCTGACATTCCATGTGGAGCTGCCTTAAAAAAGATGGCCAGCCTATTAGACAAGTCAAATATATCTATCTAG 1359 0.4378 MKQKTPSSPTTARNASKMQGDKSLQSPPPPPPPRLRASSKAPKSPPEIVNRESISSTRAKSVPPDLKNVSRAKRGVVVNKPKLNEEAKVVVVARPRRRVGDFDLQKNEDDDPDGKKKKELQEKLEVSENLIKSLQSEVLALREELDRVKSLNVELESRNTKLTQNLAAAEAKISTVDIGNNGKKGPIGEHQSPKFKDIQKLIAEKLERSRVKKEGTPEIIFAKASISAPTPSYAIPETTSIGRKSPPNTCLQPPPPVTSVGRKSPSNTCLQPPPPPPIPTRPLARLANSQKSPAIVELFHSLKNKDWKIDSKGSVNHQRPVVISAHSSIVGEIQNRSAHLLAIRADIETKGEFINDLIRKVVDAAFTDIEEVLKFVDWLDVKLSSLADERAVLKPFKWPEKKADAMREAAVEYHELKMLEQEISSYKDDPDIPCGAALKKMASLLDKSNISI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00387 452 MobiDBLite consensus disorder prediction 24 39 - -
Gma17g00387 452 PANTHER F11A17.16 1 452 - -
Gma17g00387 452 Coils Coil 117 172 - -
Gma17g00387 452 MobiDBLite consensus disorder prediction 49 63 - -
Gma17g00387 452 MobiDBLite consensus disorder prediction 255 279 - -
Gma17g00387 452 MobiDBLite consensus disorder prediction 1 75 - -
Gma17g00387 452 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 452 IPR040265 -
Gma17g00387 452 Coils Coil 402 422 - -
Gma17g00387 452 MobiDBLite consensus disorder prediction 1 23 - -
Gma17g00387 452 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00387 Gma-Chr17 3142612 3147263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00387 - - gmx:100820135 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00387 17 3142612 3147263 Gma17g00387 17 3142612 3147263 ECH
Gma17g00387 17 3142612 3147263 Gma13g00983 13 23934838 23939240 GST
Gma17g00387 17 3142612 3147263 Gma15g01757 15 19549490 19556802 PCT
Gma15g01757 15 19549490 19556802 Gma17g00387 17 3142612 3147263 PCT