Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00338 ATGAAAATTATGGAATCATTAGCTCTTATCTTCTACAGTACTCTTGTTTTAGCTACGATTTCAGTTCCAGCAACTAACTCCAGAATCATCCATCAAAAAAACAATGCCAATCTGATTGAAGAAACTTGCAAGCAGACACCCCATCACGACCTTTGCATCCAATACCTCTCCTCCGACCCTCGCAGCACCGAAGCAGATGTGACAGGGCTGGCACTTATTATGGTCAACGTAATCAAAATCAAAGCAAACAATGCATTGGACAAAATCCACCAACTGCTTCAGAAAAACCCTGAACCTAGTCAAAAGGAACCACTGAGTTCGTGTGCTGCTAGATACAAAGCAATTGTGGAAGCTGACGTGGCACAAGCCGTTGCGTCTCTGCAGAAAGGAGACCCCAAGTTCGCAGAAGATGGTGCCAATGATGCTGCTATTGAGGCCACCACTTGTGAGAACAGCTTCTCTGCTGGGAAATCGCCACTCACCAATCACAACAATGCTATGCACGATGTTGCAACCATAACTGCAGCTATAGTTAGACAATTGCTCTAG 549 0.4481 MKIMESLALIFYSTLVLATISVPATNSRIIHQKNNANLIEETCKQTPHHDLCIQYLSSDPRSTEADVTGLALIMVNVIKIKANNALDKIHQLLQKNPEPSQKEPLSSCAARYKAIVEADVAQAVASLQKGDPKFAEDGANDAAIEATTCENSFSAGKSPLTNHNNAMHDVATITAAIVRQLL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00338 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 182 - -
Gma17g00338 182 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 181 IPR006501 GO:0004857
Gma17g00338 182 Pfam Plant invertase/pectin methylesterase inhibitor 37 177 IPR006501 GO:0004857
Gma17g00338 182 CDD CIF_like 36 181 IPR034087 GO:0004857|GO:0043086
Gma17g00338 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 181 IPR035513 -
Gma17g00338 182 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 19 182 - -
Gma17g00338 182 SMART PMEI_2 34 177 IPR006501 GO:0004857
Gma17g00338 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00338 Gma-Chr17 2707351 2708334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00338 - - gmx:100306719 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00338 17 2707351 2708334 Gma17g00338 17 2707351 2708334 ECH