Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00333 ATGAACAAGTTGCATATTGAAGGATCTTCGTCTGGGAGTGGATCATCTAGCTTCAGAAGAAAACCTGTCATCATTATAGTTGTGGGAATGGCAGGGAGTGGGAAGACAACACTCATGCATAGGTTGGTATGCCATACACATTTGAAAGACATTCGGGGTTATGTGGTGAATCTCGATCCTGCCGTCATGACACTCCCATATGCTGCTAACATTGATGTGAGAGACACTGTTAAATACAAAGAAGTCATGAAGCAGTTTAACCTTGGCCCTAATGGTGGAATTTTGACTTCCCTGAACTTGTTTGCCACCAAGTTTGATGAGGTAATTTCTGTAATTGAGAAACGGGCAGATCAACTTGACTATGTTCTTGTGGATACCCCTGGTCAGATTGAAATATTTACCTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCATCTACATTTCCCACTGTAGTTGCCTATGTAGTTGATACACCCCGTTCAGAAGATCCCACCACTTTCATGAGCAACATGTTGTATGCTTGTAGTATCCTCTACAAGACAAGGTTACCTCTCATCTTGACTTTCAACAAGGTTGATGTAGCAGCACATCAGTTTGCTTTGGAGTGGATGGAGGATTTTGAGGCGTTCCAAACAGCCGCAAGTTCAGATCACTCGTACTCATCAACTTTAACTCAGAGCCTTTCTCTTGTGCTAGATGAATTCTACAACAATTTAAAATCTGTTGGAGTTTCTGCAGTTTCTGGTGTAGGAATGGAAGCCTTCTTTAATGCTGTCGAAGCCAGTGCAGAGGAATACATGGAGACATACAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCAACGTTTGGAGGAAGACCGCAGGAAGGAGAGCATGGATAAACTGAGGAGGGACATGGAGAAATCTGGGGGAGAAACTGTAGTCTTGAGCACTGGTTTGAAGGACAAAGAAGCAAGTAAAAGTATGATGGATGAGGAAGACGAGGACGAGGAAATGGATGATGATGATGATGATGATTTGGGGATATATACTGAAGAGGAAGATGCTATAGATGAGGACGAAGATGAGGAGGACAATCATATCATCAACAGTCCGAATAAAGAAATACAACGAGCTGATAGAGGAGACAAGAAAAGAAAGAGAAAGAAACCCGTCTATGGCGGAGGTTCCGCACTCGAAGAAGCTCAGCTTCGTTTCGATAATTTGAAGTCCAAATTCGTCGAAATCTTCGGTCATCATCCTCAAATCTTCGCTCGCTCACCTGGAAGAGTGAACTTGATTGGGGAGCACATTGATTATGAAGGTTATTCGGTGCTGCCTATGGCAATTCGGCAAGACACGATCGTGGCGATTCGGAAAAATGAGGCGGAAAAGGTTCTCAAGATAGCTAACGTGAATGGTGAAAAATATTCACTTTGTACTTATCCCGCCGATCCTCTCCAGGAAATCGACTTGAAGAACCACAAATGGGGACATTATTTTATATGTGGGTACAAAGGTTTCCATGACTATGCAAAGTTGAAAGGAGTGAATGTTGGTGAACCTGTTGGACTTGAAGTTCTTGTTGATGGAACAGTGCCGACAGGTTCTGGACTATCAAGCTCTGCAGCGTTTGTCTGCTCATCCACAATTGCTATTATGGCTGCTTTTGATGTGAACTTCCCAAAGAAAGAACTTGCACAAGTTACATGTGATTGTGAACGACATATTGGGACTCAATCTGGTGGGATGGATCAGGCAATCTCTGTCATGGCCAAGACTGGGTTTGCAGAACTGATTGATTTCAACCCAATTCGTGCAACAGATGTGCAACTTCCTGCTGGTGGGACTTTTGTGATAGCTCATTCTTTGGCAGAGTCTCAAAAGGCTGTTACTGCTGCCACAAATTATAATAATAGGGTTGTTGAATGCCATTTGGCTTCTATTGTGCTCGCTATAAAGCTAGGGATGGATCCAAAAGAGGCAATATCAAAAGTGAGCACACTGTCTGATGTTGAAGGGTTATGCGTATCATTTGCTGGTATTTATAACTCATCTGATCCTGTACTTGCTGTAAAGGAATATTTGAAGGAAGAACCATATACAGCTGAAGAAATTGAAGCAGTTACAGGGGAAAAGCTGACTTCATTTTTGAACAATAATGCAGCTTATTTAGAAGTGTTAAAAGTTGCAAAGCAATACAAGTTGCATCAGAGAGCTGCTCATGTGTATTCAGAAGCCAAGAGGGTTCATGCTTTCAAGGATGTCGTATCTTCGAATCTAAGTGACGAGGACATGCTAAAGAAGCTTGGTGACCTTATGAACGAGAGTCATCATAGCTGCAGCGTTTTATATGAATGCAGCTGTCCGGAGTTGGAAGAACTTGTAAATATTTGTCGTAACAATGGTGCTCTTGGGGCAAGGCTTACTGGAGCTGGATGGGGTGGTTGTGCTGTTGCTTTGGTGAAAGAGAGCATAGTTCCACAATTTATCCTTAATTTGAAGGAATGTTTCTACCAGTCTAGAATAGACAAGGGCGTTATTAAGAAGAACGATCTTGGCCTTTATGTATTTGCTTCCAAGCCATCAAGTGGTGCTGCTATCTTCAAGTTTTAG 2604 0.4243 MNKLHIEGSSSGSGSSSFRRKPVIIIVVGMAGSGKTTLMHRLVCHTHLKDIRGYVVNLDPAVMTLPYAANIDVRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAHQFALEWMEDFEAFQTAASSDHSYSSTLTQSLSLVLDEFYNNLKSVGVSAVSGVGMEAFFNAVEASAEEYMETYKADLDKRREEKQRLEEDRRKESMDKLRRDMEKSGGETVVLSTGLKDKEASKSMMDEEDEDEEMDDDDDDDLGIYTEEEDAIDEDEDEEDNHIINSPNKEIQRADRGDKKRKRKKPVYGGGSALEEAQLRFDNLKSKFVEIFGHHPQIFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKNEAEKVLKIANVNGEKYSLCTYPADPLQEIDLKNHKWGHYFICGYKGFHDYAKLKGVNVGEPVGLEVLVDGTVPTGSGLSSSAAFVCSSTIAIMAAFDVNFPKKELAQVTCDCERHIGTQSGGMDQAISVMAKTGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECHLASIVLAIKLGMDPKEAISKVSTLSDVEGLCVSFAGIYNSSDPVLAVKEYLKEEPYTAEEIEAVTGEKLTSFLNNNAAYLEVLKVAKQYKLHQRAAHVYSEAKRVHAFKDVVSSNLSDEDMLKKLGDLMNESHHSCSVLYECSCPELEELVNICRNNGALGARLTGAGWGGCAVALVKESIVPQFILNLKECFYQSRIDKGVIKKNDLGLYVFASKPSSGAAIFKF 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00333 867 Pfam Conserved hypothetical ATP binding protein 27 265 IPR004130 -
Gma17g00333 867 Pfam GHMP kinases N terminal domain 523 587 IPR006204 GO:0005524
Gma17g00333 867 SUPERFAMILY Ribosomal protein S5 domain 2-like 398 610 IPR020568 -
Gma17g00333 867 CDD GPN1 23 263 - -
Gma17g00333 867 Pfam GHMP kinases C terminal 764 835 IPR013750 -
Gma17g00333 867 TIGRFAM gal_kin: galactokinase 404 839 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Gma17g00333 867 PANTHER MEVALONATE KINASE/GALACTOKINASE 386 866 - -
Gma17g00333 867 MobiDBLite consensus disorder prediction 281 306 - -
Gma17g00333 867 MobiDBLite consensus disorder prediction 281 390 - -
Gma17g00333 867 ProSitePatterns Galactokinase signature. 425 436 IPR019741 -
Gma17g00333 867 Pfam Galactokinase galactose-binding signature 408 456 IPR019539 -
Gma17g00333 867 Gene3D - 22 280 IPR027417 -
Gma17g00333 867 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 262 IPR027417 -
Gma17g00333 867 SUPERFAMILY GHMP Kinase, C-terminal domain 613 842 IPR036554 -
Gma17g00333 867 PRINTS Galactokinase signature 425 443 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Gma17g00333 867 PRINTS Galactokinase signature 520 538 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Gma17g00333 867 PRINTS Galactokinase signature 734 748 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Gma17g00333 867 Coils Coil 269 296 - -
Gma17g00333 867 Gene3D - 407 606 IPR014721 -
Gma17g00333 867 MobiDBLite consensus disorder prediction 363 378 - -
Gma17g00333 867 PRINTS Mevalonate kinase family signature 569 588 - -
Gma17g00333 867 PRINTS Mevalonate kinase family signature 423 447 - -
Gma17g00333 867 PRINTS Mevalonate kinase family signature 802 819 - -
Gma17g00333 867 PRINTS Mevalonate kinase family signature 527 549 - -
Gma17g00333 867 MobiDBLite consensus disorder prediction 325 362 - -
Gma17g00333 867 PANTHER BNAA01G32760D PROTEIN 386 866 - -
Gma17g00333 867 ProSitePatterns GHMP kinases putative ATP-binding domain. 529 540 IPR006203 GO:0005524
Gma17g00333 867 Gene3D - 632 782 - -
Gma17g00333 867 Gene3D - 607 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00333 Gma-Chr17 2670308 2683813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00333 K18674 - gmx:100803230 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00333 17 2670308 2683813 Gma17g00333 17 2670308 2683813 ECH