Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00315 ATGGGTATCCATTTGAACAGGGTCATCAATAATGTTGGGATTCTGCTTCGAGTTTTTGTAGTCTTGGTGGTCCTGTTTGGCATTTCAACTTCATACGATCTCCCTTCTACTTTTATATTCGGAGATTCACTTGTTGACGCGGGAAACAATAATTACCTTGTTTCCCTCTCAAAGGCTAATTATCTACCCAATGGCATTGATTTTGGAAGACCAACGGGAAGGTTCACTAATGGAAGAACCATCGTGGACATCGAATTGGGTACCGGTTTCACCCCACCTTATTTGGCACCCTCCACAATTGGACCGGTAATTCTGAAGGGTGTAAATTATGCCTCTGGTGGAGGTGGAATTCTCAATTTCACTGGAAAAGTCTTCGGTGGTCGACTGAACTTTGACGCACAGATAGATAGTTTTGCAAATACCAGGCAAGACATCATATCCAGCATTGGTGTTCCTGCGGCTCTTAATCTACTCAAAAGGGCATTGTTCACCGTCACAATAGGCTCAAACGATTTCATAAATAACTACCTAGCACCAGCACTCACATTTTCCGAGCGGAAATCGGCGTCTCCAGAAATCTTTGTGACCACCATGATGTCAAAACTCAGAGTTCAGCTCACTAGGTTATTCAACCTGGGAGCTAGAAAAATTGTTGTGGCAAATGTGGGGCCCATTGGGTGTATACCAAGTCAGAGGGATGCAAACCCAGGTGCAGGAGATAGCTGTGTTGCTTTCCCCAATCAGCTGGCACAGTTATTTAATTCCCAGCTAAAGGGCCTCATTACAGATCTCAACTCAAATCTGGAGGGTGCAGTATTTGTTTATGCAGATGTCTACCAAATTTTACAAGATATTCTCCAGAGTTATGTAGCACTTGGTTTTGATAATGCATTTTCTGCTTGCTGTCACGTTGCTGGGCGCTTTGGAGGTCTGATCCCCTGTGGTCCTACATCGAGACTTTGCTGGGACCGATCCAAGTATGTGTTTTGGGACCCTTACCACCCTTCTGATGCTGCAAATGTTATCATCGCTAAACGTCTCTTAGATGGTGGTTCCAATTATATTTGGCCAAAGAACATTCGCCAACTCTTTCAATCTTAA 1101 0.4396 MGIHLNRVINNVGILLRVFVVLVVLFGISTSYDLPSTFIFGDSLVDAGNNNYLVSLSKANYLPNGIDFGRPTGRFTNGRTIVDIELGTGFTPPYLAPSTIGPVILKGVNYASGGGGILNFTGKVFGGRLNFDAQIDSFANTRQDIISSIGVPAALNLLKRALFTVTIGSNDFINNYLAPALTFSERKSASPEIFVTTMMSKLRVQLTRLFNLGARKIVVANVGPIGCIPSQRDANPGAGDSCVAFPNQLAQLFNSQLKGLITDLNSNLEGAVFVYADVYQILQDILQSYVALGFDNAFSACCHVAGRFGGLIPCGPTSRLCWDRSKYVFWDPYHPSDAANVIIAKRLLDGGSNYIWPKNIRQLFQS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00315 366 Pfam GDSL-like Lipase/Acylhydrolase 38 346 IPR001087 GO:0016788
Gma17g00315 366 Gene3D SGNH hydrolase 28 351 IPR036514 -
Gma17g00315 366 CDD SGNH_plant_lipase_like 35 350 IPR035669 -
Gma17g00315 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 22 365 - -
Gma17g00315 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 22 365 - -
Gma17g00315 366 SUPERFAMILY SGNH hydrolase 104 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00315 Gma-Chr17 2530511 2532120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00315 34 366 Acyl Lipid Metabolism Gene Families AT4G10950 35.693 4.78e-67 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00315 - - gmx:100809250 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00315 17 2530511 2532120 Gma17g00315 17 2530511 2532120 ECH
Gma17g00315 17 2530511 2532120 Gma15g01301 15 11535842 11537811 PCT
Gma17g00315 17 2530511 2532120 Gma09g00314 09 2957919 2959991 PCT
Gma15g01301 15 11535842 11537811 Gma17g00315 17 2530511 2532120 PCT
Gma09g00314 09 2957919 2959991 Gma17g00315 17 2530511 2532120 PCT