Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00293 ATGGTGAGAGCACGGCCAAGGGACATAGATCACTTGCCCAAGAACGCCGCCAACTACACAGCGTTAACGCCGTTGTGGTTTCTAGAAAGAGCTGCTACGGTGCACCCCACCAGAAACTCCCTCATCCATGGATCTCGTCACTACACGTGGCAGCAGACTTATCACCGTTGCCGTCGATTCGCGTCCGCTCTTTCTAACCATTCCATCGGTCTCGGAAACACTGTTGCTGTAATTGCACCCAATATTCCAGCTCTTTATGAAGCTCACTTTGGGATTCCAATGGCTGGGGCTGTGTTGAACCCTCTTAATATTAGGCTAAATGCATCCACAATAGCTTTTCTTCTTGGTCATTGCACAGCTGCAGCAGTAATAGTTGACCAAGAGTTCTTTTCTTTAGCAGAAGAAGCTTTGAAAATATGGTCTGAGAAGGCCAAAACCTTCAGCCCTCCACTTTTAATAGTCATTGGTGATGAAAATTGCGACCCTAAGGCACTTAAATATGCTCTGGGCAAAGGAGCCGTTGATTATGAGGATTTTCTCCAGAGTGGAGATCCAGAATATGCATGGAAACCCCCAGAGGATGAGTGGCAGAGCATTTCATTGGGTTACACATCCGGTACCACTGCTAGTCCAAAGGGTGTGGTTTTACATCACCGTGGAGCCTATCTCATGTCTCTGAGTGGAGCTCTTATTTGGGGAATGACTGAAGGAGCTGTGTATCTTTGGACACTTCCCATGTTTCATTGCAATGGTTGGTGTTACACTTGGACACTTGCAGCTCTGTGTGGTACAAACATATGCCTTCGGCAGGTAACACCGAAGGCAGTATATGAAGCCATTGCCAAGTATAAAGTGAGTCATTTTTGTGCAGCACCAGTGGTTCTTAACACAATAGTTAATGCCCCAGCCGAGGACACCATTCTTCCTCTACCCCATGTTGTGCATGTGAATACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTTCCGGCATGTCTGAACGAGGATTTCGTGTCACACACACTTATGGTCTCTCAGAAACCTATGGCCCCTCCGTCTATtgtgcctggaaaccagaatgggaatcacttccccctgaaaaccgagcccggctcaatgcaagacaaggtgttaggtacgttggcttggaaggcctggatgtggtgaacacaaaaaccatggaacctgttcctgctgatggtaaaactgttggtgagattgtgatgcggggtaattctgtgatgaaaggctacttaaagaaccctaaagctaacgaggagacctttgcaaatggatggtttcattccggggatcttgctgtgaagcatccagatgggtatATAGAAATTAAAGACAGATCAAAGGACATCATAATCTCTGGTGCTGAAAACATCAGCAGTGTAGAGATAGAGAATACTCTTTACTCGCACCCTGCAATACTGGAAGCAGCAGTGGTTGCAAGGGCAGATGAGAAATGGGGCGAGTCTCCCTGCGCTTTTGTGACATTAAAGCCAGGAGTGGATAAAAGCAATGGGCAGCGTATAATTGAGGATATACTAAAGTTCTGCAAAGCCAAGATGCCTGCTTATTGGGTTCCAAAATCAGTTGTGTTTGGAGCCTTACCTAAGACAGCTACTGGGAAGATACAGAAGCATATACTGAGGGCCAAGGCAAAAGAGATGGGACCTGTAAAGTTGAGTAAGCTATAA 1707 0.3884 MVRARPRDIDHLPKNAANYTALTPLWFLERAATVHPTRNSLIHGSRHYTWQQTYHRCRRFASALSNHSIGLGNTVAVIAPNIPALYEAHFGIPMAGAVLNPLNIRLNASTIAFLLGHCTAAAVIVDQEFFSLAEEALKIWSEKAKTFSPPLLIVIGDENCDPKALKYALGKGAVDYEDFLQSGDPEYAWKPPEDEWQSISLGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLPMFHCNGWCYTWTLAALCGTNICLRQVTPKAVYEAIAKYKVSHFCAAPVVLNTIVNAPAEDTILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPPENRARLNARQGVRYVGLEGLDVVNTKTMEPVPADGKTVGEIVMRGNSVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILEAAVVARADEKWGESPCAFVTLKPGVDKSNGQRIIEDILKFCKAKMPAYWVPKSVVFGALPKTATGKIQKHILRAKAKEMGPVKLSKL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00293 568 Pfam AMP-binding enzyme 28 459 IPR000873 -
Gma17g00293 568 Gene3D - 455 562 IPR045851 -
Gma17g00293 568 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 7 568 - -
Gma17g00293 568 CDD ttLC_FACS_AEE21_like 19 555 - -
Gma17g00293 568 Gene3D - 8 454 IPR042099 -
Gma17g00293 568 SUPERFAMILY Acetyl-CoA synthetase-like 14 559 - -
Gma17g00293 568 PANTHER ACYL-ACTIVATING ENZYME 7 568 - -
Gma17g00293 568 Pfam AMP-binding enzyme C-terminal domain 468 547 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00293 Gma-Chr17 2367964 2371595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00293 1 568 Miscellaneous Gene Families AT3G16910 74.165 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00293 K01913 - gmx:100808187 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00293 17 2367964 2371595 Gma17g00293 17 2367964 2371595 ECH