Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00259 ATGCTTGCAGAACAGAAATTCCAAAAGACATACCCGACAGTCACCGAGGTATTGGAAGAAGTAAGGAGAATGACAGACATAGGGTTCCCAATAGCAGCCATGAGTCTTGTGGGTTACCTCAAAAACATGACCTTAGTTGTGTGCATGGGAAGATTGGGAAGCCTGGAATTAGCCGGAGGTTCTTTGGCCATAGGCTTGACCAACATAACCGGTTACTCTGTCCTCTCAGGTCTAGCCATGGGCATGGAACCCCTCTGCACCCAAGCCTTCGGTTCTCGAAACTTGTCCTTACTCTCTCTAACTTTGCAGAGAACAATTCTCATGTTACTGCTATTTTCTCTCCCCATTTCTCTTCTTTGGCTCAACCTCGAATCTCTCATGCTATGCCTTCGCCAGAATCCAGACATAACCCGAGTAGCAACCCTCTATTGCCGCTTCGCAATTCCAGACCTCATTGCCAATAGCTTCCTCCACCCTCTTCGAATCTTCCTACGTAGTAAAGGCACAACTTGGCCACTGTTGTGGTGCACTTTACTATCCATTCTTCTACACCTTCCAACCCTCACTTTTCTAACCTTCAAACTTAACCTTGGCGTGCCGGGAATCGCTATCTCATCCTTTGTTGCCAATTTTAGCAACCTTTTCTTCCTTCTTTTGTACATGTTCTATACACGTGTCCCCAAGGAGTCCTTACACGTGTCTTTACTAATGTCACATAATAATTTAATAATAACATGTAGCAGCAGTACTAGTACTATTGCCAAGGAATGGGGTATGCTAATGAAATTTTCGATACAAAGTTGTCTAGCTGTTTGCTTGGAATGGTGGTGGTACGAGTTGATGACAATTTCAGCAGGTTACCTTGATAACCCTCGTGTTGCTCTAGCCACTGCTGGCATAGTGATACAAACCACGTCTCTTATGTACACTTTGCCAACGGCACTAAGTGCATCAGTGTCAACCAGAGTAGGAAATGAACTTGGAGCGGGGCAGGGTGAAAGGGCAAATTTGTCAACGGTGGTGGCAATAGGATTAGCACTTGTAAGCTCAATATTTGGTTTGTTGTGGACCACAATGGGAAGAGAAAGGTGGGGGAGAGTGTTCACTAGTGATAGCGAGGTGTTACAATTGACCGTGGCAGTGTTACCTATAATTGGACTGTGTGAGTTAGCCAATTGTCCGCAAACCACAAGCTGTGGAATCCTTAGAGGAAGTGCTAGGCCTGGTATTGGGGCTGTTATTAACTTTTGCTCATTTTACTTGGTAGGAGCACCAGTGGCAATTGTTTTAGCCTTCTATTGGAAACTCGGGATGGTTGGTCTGTGTTATGGGTTGCTGGCAGCACAAATCGCATGTGTGGTGTCAATTTTTGGTGTGGTATATAAGACTGATTGGGAAAGAGAGTCATTGAAGGCTAGATGCTTGGTGGGAAAGGCTTCATGTGGCACATTTGCATATGATGAGGACCAAACTGATGCACTCAAATGTGAAGAAGGTGTTGTCTTTCTCAACTCCCAAAAGTGA 1524 0.4501 MLAEQKFQKTYPTVTEVLEEVRRMTDIGFPIAAMSLVGYLKNMTLVVCMGRLGSLELAGGSLAIGLTNITGYSVLSGLAMGMEPLCTQAFGSRNLSLLSLTLQRTILMLLLFSLPISLLWLNLESLMLCLRQNPDITRVATLYCRFAIPDLIANSFLHPLRIFLRSKGTTWPLLWCTLLSILLHLPTLTFLTFKLNLGVPGIAISSFVANFSNLFFLLLYMFYTRVPKESLHVSLLMSHNNLIITCSSSTSTIAKEWGMLMKFSIQSCLAVCLEWWWYELMTISAGYLDNPRVALATAGIVIQTTSLMYTLPTALSASVSTRVGNELGAGQGERANLSTVVAIGLALVSSIFGLLWTTMGRERWGRVFTSDSEVLQLTVAVLPIIGLCELANCPQTTSCGILRGSARPGIGAVINFCSFYLVGAPVAIVLAFYWKLGMVGLCYGLLAAQIACVVSIFGVVYKTDWERESLKARCLVGKASCGTFAYDEDQTDALKCEEGVVFLNSQK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00259 507 PANTHER PROTEIN DETOXIFICATION 55 12 481 - -
Gma17g00259 507 Pfam MatE 267 428 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma17g00259 507 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma17g00259 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 481 - -
Gma17g00259 507 CDD MATE_eukaryotic 20 471 IPR045069 GO:0042910|GO:1990961
Gma17g00259 507 TIGRFAM matE: MATE efflux family protein 30 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00259 Gma-Chr17 2116412 2118652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00259 K03327 - gmx:100798616 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00259 17 2116412 2118652 Gma17g00259 17 2116412 2118652 ECH
Gma17g00259 17 2116412 2118652 Gma09g00392 09 3697298 3699172 PCT
Gma09g00392 09 3697298 3699172 Gma17g00259 17 2116412 2118652 PCT