Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00239 ATGGATGCAAAGTCTGCTGAAGCTGTTGTTCCCTCAGAACCGTTGAAGTATCAGACATGGTTGTTGAAAGTTTCGATCCACTGTGAAGGTTGCAGGAGGAAAGTTAAGAAGGTTCTGCAGAGCATTGATGGTGTTTTTACCACAACGGTTGACCCGCAACAGCAGAAAGTAACCGTCACTGGAAGCGTTGGAGTTGAGACGCTGATAAGGAAACTGGTCAAAGCTGGAAAACACGCCGAGATTTGGCCGGAGAATCTCGCTGCCACCGGAAAGGGAAAGAGCTCCTGCAAAGACAAGATGCAGCGGCAGAACAACAACAACAACAAAGAACAAGGAGAACCAGAAAGCGTGGAAAACAACTCTACTACAGTAAATGCAGAACCCAACAGTAGAAACACGAGCAAAAAAAAGGGAATTGAAAAAAATGCTGAAAAGCGCAACAACGGCGGAAACAAGAGCACCGGAAGCTCAAAGTCCGTCGGCGTAGCCGGAGAAAGTGAGGCAGCGGAACCGGAGAACAAGGGTGGTCAACGTGAAGGAGGTTCTGGGAAGAAAAAGAAAAAGAAAGGTCAAAGTGGGGGTGAGAGAGCAGCATGTGGTGATGCACCTGCACACACTGGATCGGAGGTGCAGTGTTCTGGGCAGGTGAATCTGAGCCATACACGTCAGCAATCATACATGTATCCAGAAAGTTACTGTTATCCCCCACAGCCACAGGTGTATCTTGCAACAACCCAGAACAACAACAACAGGTTATGTCCTTCTTACTATGTTTCACCATTGCCCTACATGTGTGCAGGCTTCGACCATGACCCTCCTTATCGCTTTCAATCTCCACCCTTCGAGATCTTCAGTGACGAGAATGCCAACGCTTGTTCTATTATGTGA 888 0.4786 MDAKSAEAVVPSEPLKYQTWLLKVSIHCEGCRRKVKKVLQSIDGVFTTTVDPQQQKVTVTGSVGVETLIRKLVKAGKHAEIWPENLAATGKGKSSCKDKMQRQNNNNNKEQGEPESVENNSTTVNAEPNSRNTSKKKGIEKNAEKRNNGGNKSTGSSKSVGVAGESEAAEPENKGGQREGGSGKKKKKKGQSGGERAACGDAPAHTGSEVQCSGQVNLSHTRQQSYMYPESYCYPPQPQVYLATTQNNNNRLCPSYYVSPLPYMCAGFDHDPPYRFQSPPFEIFSDENANACSIM 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00239 295 MobiDBLite consensus disorder prediction 133 147 - -
Gma17g00239 295 CDD HMA 22 80 IPR006121 GO:0046872
Gma17g00239 295 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 295 - -
Gma17g00239 295 SUPERFAMILY HMA, heavy metal-associated domain 16 83 IPR036163 GO:0046872
Gma17g00239 295 MobiDBLite consensus disorder prediction 89 209 - -
Gma17g00239 295 MobiDBLite consensus disorder prediction 171 194 - -
Gma17g00239 295 Gene3D - 16 81 - -
Gma17g00239 295 MobiDBLite consensus disorder prediction 99 132 - -
Gma17g00239 295 Pfam Heavy-metal-associated domain 24 78 IPR006121 GO:0046872
Gma17g00239 295 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 1 295 - -
Gma17g00239 295 ProSiteProfiles Heavy-metal-associated domain profile. 18 81 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00239 Gma-Chr17 1947686 1948976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00239 - - gmx:102666667 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00239 17 1947686 1948976 Gma09g00419 09 3940099 3941476 PCT
Gma09g00419 09 3940099 3941476 Gma17g00239 17 1947686 1948976 PCT