Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01738 ATGGAGAAACTGAGACCAGCGTGGGCCGTTAAGGCGATCATCGTGATCGTGTTCACTTCGATCCTCTTCCGATGCGTCTGCGGCGAGAACCACACCGTCGGTGGAGCTTCCGGCTGGGATCTCGGTTCCAATATCCAAGCCTGGTCTTCTACGACAACGTTTAACGTTGGTGACGATCTCGTGTTCTCATACACGGCGGCGCACGACGTGATGGAAGTGAACCAACTAGATTACGACACGTGTAAGATAGCCAACGCTCTGGCAACGTACGATAACGGAGAGACCGTGATCCACCTGAGCGACGCCAAAACGCGCTACTTCGTATGCGGCCGAATGGGCCATTGCCAACAGGGCCTTAAACTACAGGTCCAAATTTTAGCCCAGTCCAATAACGGAACCAGCAATGATCAAAACCAAAGCCCCGGCGGTTCTCCTCCGTCTACTTCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCAGGATGATGAACAGCCACCTGCAGACGAGCCCGTGCCGTGCGATTGTTCCCGTGCGGAGGAGCGCCATGGGGTGGTGCCGTTGATTACGCTCGTAATCGTGCTCGCGTTCGCTCGTACCCATTTCTTCATCGCATTTCCACATCTCCGTTTTCACAACATCCGTTGA 645 0.5612 MEKLRPAWAVKAIIVIVFTSILFRCVCGENHTVGGASGWDLGSNIQAWSSTTTFNVGDDLVFSYTAAHDVMEVNQLDYDTCKIANALATYDNGETVIHLSDAKTRYFVCGRMGHCQQGLKLQVQILAQSNNGTSNDQNQSPGGSPPSTSPPPPPPPPPPQDDEQPPADEPVPCDCSRAEERHGVVPLITLVIVLAFARTHFFIAFPHLRFHNIR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01738 214 SUPERFAMILY Cupredoxins 28 125 IPR008972 -
Gma16g01738 214 MobiDBLite consensus disorder prediction 144 166 - -
Gma16g01738 214 Gene3D - 28 131 IPR008972 -
Gma16g01738 214 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Gma16g01738 214 CDD Phytocyanin 30 125 - -
Gma16g01738 214 PANTHER COPPER ION BINDING / ELECTRON CARRIER PROTEIN-RELATED 30 195 - -
Gma16g01738 214 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Gma16g01738 214 PANTHER BLUE COPPER PROTEIN 30 195 IPR039391 GO:0009055
Gma16g01738 214 MobiDBLite consensus disorder prediction 130 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01738 Gma-Chr16 38489751 38490870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01738 13 126 Miscellaneous Gene Families AT2G32300 43.478 3.06e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01738 - - gmx:102664120 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01738 16 38489751 38490870 Gma09g01561 09 40712015 40713153 GST