Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01728 ATGGCGAGGAAGATGCATTGTGCCCCTCAAGAGATAGGCAATGATAGTCCAAAAGTTTCAGAAGCAAGAAAGGATTCCATATCAACCGTATATCAACAGCAAAATAAACTCACATCTTTAGAGGATTGTCAAGAATCTTCTCTTTTAAAGATTAACACTGATAGTAGGTGTGCAATCCTTCCAATCTTTAGCTTCGAGCCTGATGGAACCTGGAGAATTGTTGCCCTACCAGTGCAGTGTCAAAATCACATTAACTTAGCTTCTGGTGTAAATATGGATGGTCTGCAACTCCTTTTCCCTCCACCTCTCAATAGGTTGAAGATTGATCAATGTAAGGGGCCTAGAGTACCTCTTCCTCCCTATGCTTATTCAGCTAAATCATGTACTAAAAAAGGCTTTACTGGCTCAAATGTGCATCGTCGATGTCAAAACAAGATTGCTAACAGAGTTTCTAAACTGAATGAACTCCCCGACAATTCTTGTTCTCAAAGTTCATTAGTCAGTGGCCCTGGCTTGTTCCCTGGTAGTTCTGCTGCACTTAATTCATCTGATAAGTACACAAGTCATTCCAAGGAAGATGACAAGTCTTTGAAGAAAAACTCAAGAAAAAGGGCAAGAAAGAAAGTTAAACAGAGTAAGAAGAAGTCAAGTGACAGTGGCTCTCCTGAACGTGAAGTTCTTACTGAGGAATATGTCTCTGTAAGTTTGACTTCTGAGACCTGCAGCAGCAATGATGTGGATAAGGAGGATGTGGGAGAATTTTCAACTTCTGATGATAGGTTAATAAAATCTGATTGTGAAAGGAATTGCAACATCAATATTATGGAAGCACCTAATAGTTGCAACTCTTATCTTAATCAGGGCATGTCAAAAGCTACTGAACCTATTGTTCAAAGTTCTGCCAGAGAATGTGCCACATTTGAACCCAAGAATCAGCTCCAAGATGAGGGCCCTGATTTTGAAGTCATTGATAGAGGAATAAAGGACATCCAACACATGGAGCCATGCTGTTTTAATGATGTACATGACTCTTTGGTGCTGGATTCAGTTTCAGGTGGTTTCAGAAGTGATGAAAGTATAAATGCTAATGATACAGGAAAGCCGTCCAACAAGGCAAATTGCACAATCACTTCAGATTCAGGAGATGGATATTCTCTTGGTCAAAACTTAACGAATGGTATTCACAATAACTGTGAACATAATGAGGGGATTTGGCATGGTGGTCAAAATTGCATCAGTAATGATAAGAGAGTTAAGCAGAAGAGAACAATGTCGAAGAGTTCAGATCTAAACAAATTTGGGGGTGCTGGAATTTTGCATGGTCGAAAAGGGAAGGAAAATAGTCATTCTGTATGGCAAAAGGTTCAGAAGAACAGTTCTGATGATGGTAGTGGTGACTTGAAGAAAGTAAACACAACTTCATCACAATTTGCTTCTACTCTAGAAAAGGATCCTTCAGTTATCAAAGAATGTAATTCTGTTAGTGTAAATGGTGTATCAAAAACTGAAGATAAGAAACACTTGAAAAATAAAATTGGTAGGAAATCAAAAGCTAAAGTGGAGTCAGGTGCAAAAACGGGCCTCGACAATTATTCCTGGAAGAGTTTCCAATTTAACGGGTCTTTGTCTAATGATCATGGGAAGGCTAGTTTTCAACAGAATGACATGTTGCATATCTCTTCTCAGGAAATTGATCAACAAGGATTGAACACTGTCTCTGGATTTTCTGATATTAATTGCCTTATGGATGGGGTCCAGACCAATGGAGTTGAACAGGTAACATCTGAAATAGGTCACAGTGCAGAGTTTCATCTGGAGGAGTCAGGTCCACAAAAAAGTGCCAGCAATATAATTGCAAAGACAAACAATGAAAATATAGATAGTCAGGATAGCTCATTCATAATGCCAGGTGAGTACATCAATCAATCAAATATGTCTGAGGAGCTGTCTCCAGATTCTTGTAATCTTGAAGGTGATGAGGTTGGTCAAAATGAGAAAGAAGTTTCTTCTGCAGACTACAATGCACAAAACCACAGTTCTGGAACTACCCTATGGAAATGGATACCAGTTGGGAAAAAAGATAGAGGGTTGGAAAAATCTGAATCAAATAGTGCACCACCAGAAAATTCTGATGCATCCTCTCGTAACAATTCTAACTCTGAAAGCAGTGTTGAACCAGAAGTGGCCTCTTCTGAAAATCCGGATTCACTAAATGCAAGCAGAGCATGCAACGGCCAGATTTACGACAAAGTGTCTTGTCTAGATGAGGGTGAGAACCACAAAATGGGTAGTCAGGTTGCACGTACATTGACAGAGCACAGGGACAAGCATGAAGCTGCTAATCACATGTTTTATGAATGTGAAAATCAAGATATGTTAGAAAATTATTCTTACAGAATAGCTCAAGCTGTGAATGATGCCTGTAAGGCACAACTGGCTTGTGAAGCAGTACACATGGCTACAGGTGGTCCAGTTGCAGAGTTTGAAAGACTACTACATTTTTGTAGTCCTGTTATTTGTAAGTCACTCAGTTCACACAGTTGTTCGGCCTGCTCACACAACCATGGTGGTGGTGCCTCACTGTGCAGACATGAGATCCCTGACCTATCTTTGGGATGCCTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGGTTAGAGATAAGGGCTCAGGGTCATGAAAATCCGAAGAGACAAGGAGGTGTTGCTGATTTTCCATTCCGTGCCTATTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCATGAAAATTTATGTGTAAATAACGGTGACAGGCTCCCAAATTCTGAGGTTTCAGAGGCATGTGAAATGGTTGACATTTCAGCAAACTCATCTACTGCCAGTCAACATTCAATATTTTCTGTTCTCTTTCCTCAGCCTCGCAATCAGGACAAAAGCAGTCAAACACCAAAGGAGACGGCTTCTATCAATAATGCATCTATTCCGTCTATCAACTCAACCTGCTCTGGTGATTTAGAACTTCTTTTTGAATATTTTGAATTTGAGCAACCTCAACAAAGACAACCTCTTTATGAGAAGATACAAGAACTGGTTAGAGGCCATATACCAATTGAATCTTCAACTTATGGGGACCCAACAAAACTGGATTCAATTAACCTACGAGATCTTCACCCTAGATCTTGGTTCTCAGTTGCATGGTATCCTATTTACCGCATACCAGATGGCAACTTTCGTGCATCTTTTTTGACTTACCATTCACTTGGACATTTGGTTCGTAGAAGAACTTCAGATTTGTCAACTGTAGGTTCTTGCATAGTATCTCCAACTGTGGGGCTTCAAAGCTACAATGCCCAGGGTGAATGCTGGTTCCAGCTGAAGCATTCTGCACCTGCAGCAGAAATGGTGAACTTAGAACCTTCTTTACTTCTTAAAGAGCGTTTGAGGACACTTGAGGAAACAGCATCTCTCATGGCAAGAGCTGTGGTCAACAAGGGGAACCTAACCTGTACAAACAGACACCCTGATTATGAGTTTTTCTTGTCTAGGCGACGGTATTGA 3546 0.405 MARKMHCAPQEIGNDSPKVSEARKDSISTVYQQQNKLTSLEDCQESSLLKINTDSRCAILPIFSFEPDGTWRIVALPVQCQNHINLASGVNMDGLQLLFPPPLNRLKIDQCKGPRVPLPPYAYSAKSCTKKGFTGSNVHRRCQNKIANRVSKLNELPDNSCSQSSLVSGPGLFPGSSAALNSSDKYTSHSKEDDKSLKKNSRKRARKKVKQSKKKSSDSGSPEREVLTEEYVSVSLTSETCSSNDVDKEDVGEFSTSDDRLIKSDCERNCNINIMEAPNSCNSYLNQGMSKATEPIVQSSARECATFEPKNQLQDEGPDFEVIDRGIKDIQHMEPCCFNDVHDSLVLDSVSGGFRSDESINANDTGKPSNKANCTITSDSGDGYSLGQNLTNGIHNNCEHNEGIWHGGQNCISNDKRVKQKRTMSKSSDLNKFGGAGILHGRKGKENSHSVWQKVQKNSSDDGSGDLKKVNTTSSQFASTLEKDPSVIKECNSVSVNGVSKTEDKKHLKNKIGRKSKAKVESGAKTGLDNYSWKSFQFNGSLSNDHGKASFQQNDMLHISSQEIDQQGLNTVSGFSDINCLMDGVQTNGVEQVTSEIGHSAEFHLEESGPQKSASNIIAKTNNENIDSQDSSFIMPGEYINQSNMSEELSPDSCNLEGDEVGQNEKEVSSADYNAQNHSSGTTLWKWIPVGKKDRGLEKSESNSAPPENSDASSRNNSNSESSVEPEVASSENPDSLNASRACNGQIYDKVSCLDEGENHKMGSQVARTLTEHRDKHEAANHMFYECENQDMLENYSYRIAQAVNDACKAQLACEAVHMATGGPVAEFERLLHFCSPVICKSLSSHSCSACSHNHGGGASLCRHEIPDLSLGCLWQWYEKHGSYGLEIRAQGHENPKRQGGVADFPFRAYFVPSLSAVQLFKNHENLCVNNGDRLPNSEVSEACEMVDISANSSTASQHSIFSVLFPQPRNQDKSSQTPKETASINNASIPSINSTCSGDLELLFEYFEFEQPQQRQPLYEKIQELVRGHIPIESSTYGDPTKLDSINLRDLHPRSWFSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRRTSDLSTVGSCIVSPTVGLQSYNAQGECWFQLKHSAPAAEMVNLEPSLLLKERLRTLEETASLMARAVVNKGNLTCTNRHPDYEFFLSRRRY 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01728 1181 MobiDBLite consensus disorder prediction 644 679 - -
Gma16g01728 1181 MobiDBLite consensus disorder prediction 1 24 - -
Gma16g01728 1181 MobiDBLite consensus disorder prediction 178 227 - -
Gma16g01728 1181 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 10 1180 - -
Gma16g01728 1181 MobiDBLite consensus disorder prediction 702 741 - -
Gma16g01728 1181 MobiDBLite consensus disorder prediction 968 989 - -
Gma16g01728 1181 MobiDBLite consensus disorder prediction 695 741 - -
Gma16g01728 1181 MobiDBLite consensus disorder prediction 423 450 - -
Gma16g01728 1181 Pfam Protein of unknown function (DUF789) 826 1175 IPR008507 -
Gma16g01728 1181 PANTHER DUF789 FAMILY PROTEIN 10 1180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01728 Gma-Chr16 38273483 38281622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01728 - - gmx:100817088 2132.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01728 16 38273483 38281622 Gma16g01728 16 38273483 38281622 ECH
Gma16g01728 16 38273483 38281622 Gma09g01549 09 40586436 40594535 GST