Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01690 aTGGGTGTGGATATACAAGGTAAGCTTCGTTTAGCTCTTGGCTCAGTGAAAGATCATGCCTCTATTGGCAAGGCCATGATGTACCATTACCAACATGATGGCTTTTCCAACATAGAGATTGCAGTCCTGCGTGCCACTGGCCATGACAATGGCACCATTGATGACAGATACATGCATGAAATCCTCTTCCTTGTGTCAAACACTCCAGGGTCCATTCCTTTTCTAGCTGAAAGGATTTCACGCCGCCTAAGCAAAACTAAGGATCATGCTGTGGCCCTCAAGACCCTTGTCTTGATTCATCGCCTCCTTAGAGGGGGAAACAGGTCCTTTGAACAAGAGCTATGCAAGGCACATGTCTCAGGTCACCTACAAATTAGTACAAGGTGTTTCACAAAGAGTTCTGATCACCCTTCAGTTGGTTTCCTACACAAGTATGCAGCTTATCTTGAAGAGAGGATGAGTTGGCTCATCAATCAAGCAGGAAAACTTGAACCTGTCATGTCTAAAGGGTTAGAGTTTAGGCGCTATGATGAGAAATCCATTGATATGGCATTCAGAACATTGCCTAAATGCCAAGTGCTTATTGACAAGGTGTTGGAATGCTCCCCTCATGATATTTTATGCTCAGATCATAGCCTGGCTCAAGCTGCCATGAGCAACACCTTGAGAGAAAGCTTCCAAGTTTATATGACATTCTCTGAAGGAATTGCAGCTCTTGTCAACATGTTTTTTGATCTAACAGCATCAGCCAGAGGCCTAGCCTGTGAAATACTCAAGAAAGCTTCTCTGCAGAGCCAAAAGCTTCATGATCTGTATGAAAGTTGCAAACAAGTGGTTGAAAACAAGAATTTGGATTACCCTTCTGTTCAGATAATCAGCATGAATCATGTAGTGGCATTGGAACAACTTGGTAGTCCACAAAATGAACTTGCAGCTTCACTTGTCTCTCTTTCTAGCATCTCAAGGCCACCTCCAATTTCAGGCCACTTTACAAAATCAAGAGAGATAGAGTTGGCAGTGGAAGCAAAAGAAAGCAAAAGGAGTGAAGAGAACATTGATATAGATTTGTCACCAACCCCAACTCTTCTTTCATGGACACTAGAGACTAAAATAAGCATGGTGTGGGTGGTGTTTGAAGATGAAGTTCCCAATGAATCACAGGTTCTTCCAGCACCGCAAAAGCTTGGAGGTGCTGATGCTGTTTGTGATATAAAAAGTGAATACGGTAGGCCTAGTGTGTTCCTGAATCCATTTTCTTCTAGTTTTCAAACAAGCATGTCTACAAAGGTATGA 1293 0.4277 MGVDIQGKLRLALGSVKDHASIGKAMMYHYQHDGFSNIEIAVLRATGHDNGTIDDRYMHEILFLVSNTPGSIPFLAERISRRLSKTKDHAVALKTLVLIHRLLRGGNRSFEQELCKAHVSGHLQISTRCFTKSSDHPSVGFLHKYAAYLEERMSWLINQAGKLEPVMSKGLEFRRYDEKSIDMAFRTLPKCQVLIDKVLECSPHDILCSDHSLAQAAMSNTLRESFQVYMTFSEGIAALVNMFFDLTASARGLACEILKKASLQSQKLHDLYESCKQVVENKNLDYPSVQIISMNHVVALEQLGSPQNELAASLVSLSSISRPPPISGHFTKSREIELAVEAKESKRSEENIDIDLSPTPTLLSWTLETKISMVWVVFEDEVPNESQVLPAPQKLGGADAVCDIKSEYGRPSVFLNPFSSSFQTSMSTKV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01690 430 CDD ANTH_N_AP180_plant 38 155 - -
Gma16g01690 430 SMART enth_2 36 165 IPR013809 -
Gma16g01690 430 Gene3D - 8 157 IPR008942 -
Gma16g01690 430 Pfam ANTH domain 38 302 IPR011417 GO:0005543
Gma16g01690 430 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 386 IPR045192 GO:0048268|GO:0072583
Gma16g01690 430 SUPERFAMILY GAT-like domain 174 302 - -
Gma16g01690 430 PANTHER CLATHRIN ASSEMBLY PROTEIN-RELATED 1 386 - -
Gma16g01690 430 Gene3D ANTH domain 169 313 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Gma16g01690 430 SUPERFAMILY ENTH/VHS domain 37 154 IPR008942 -
Gma16g01690 430 ProSiteProfiles ENTH domain profile. 30 163 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01690 Gma-Chr16 37857808 37859100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01690 - - gmx:100808531 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01690 16 37857808 37859100 Gma16g01690 16 37857808 37859100 ECH
Gma16g01690 16 37857808 37859100 Gma09g01492 09 39667449 39669204 GST