Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01673 ATGTCTTGCTGGTCTGCAGAAAATGCCACAAAGGCTTATCTCAACACATTGAAAATGGGTCAAAAGGCCAAAGAACCCGCGGTTGCAGAGTTCATATCAGCACTAGCCGCTGGCAACACTGCACAACTAATGGTTGTGGCATGTGCTGGTGCAGCAGACTCAACCACACTAGCATTGGTCACTGCTGCACACCAAACTGGTGGCCATGTTGTTTGCATTGTCCCTAGCCATGAGGAATTAAGTGCCTCCAAAAAAGTCCTTGGAGTAAATGCAAGTCAAGTCCAATTCATGGTTGGAGCGGCTCAAGAAGAACAAGTGCTGTTAAGCCAAGCAGATTTTGTGCTCATTGATTGCAACCTTGTGAGCCATGGAGAGATTGTTAAAGCAATCCAAAGTGGTGGTGGTGGCATGCAAAATGGCACAGTGGTTGTTGGCTACAATGCACTTAATTGTAGAGGGTCTTGGTGGTCTTCTGGATCAAAAACTCAGTTGTTGCCTATAGGAAAAGGGCTTTTGGTGACAAGATTTGGAGCAAGTGCTACTAGTCCAAAATATGGATCTGGAGTGAGTAAGATCAAAAGTAGTCGTTGGATTGTCAAGGTGGACAAATGCACTGGTGAAGAACATGTGTATAGGATCAGAGTTCCACAAGGAAAAGTGATTTAA 666 0.4489 MSCWSAENATKAYLNTLKMGQKAKEPAVAEFISALAAGNTAQLMVVACAGAADSTTLALVTAAHQTGGHVVCIVPSHEELSASKKVLGVNASQVQFMVGAAQEEQVLLSQADFVLIDCNLVSHGEIVKAIQSGGGGMQNGTVVVGYNALNCRGSWWSSGSKTQLLPIGKGLLVTRFGASATSPKYGSGVSKIKSSRWIVKVDKCTGEEHVYRIRVPQGKVI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01673 221 Pfam Protein of unknown function (DUF1442) 3 212 IPR009902 -
Gma16g01673 221 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
Gma16g01673 221 PANTHER BNAA09G06020D PROTEIN 1 220 - -
Gma16g01673 221 PANTHER DUF1442 FAMILY PROTEIN 1 220 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01673 Gma-Chr16 37761288 37762564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01673 - - gmx:100788726 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01673 16 37761288 37762564 Gma09g01477 09 39485207 39486189 GST
Gma16g01673 16 37761288 37762564 Gma10g01729 10 44455398 44456428 PCT
Gma10g01729 10 44455398 44456428 Gma16g01673 16 37761288 37762564 PCT