Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01665 ATGGTCTTAACAGATTATAGGTCCAACACTGGCAGAATAATGTGGCATTTTCAGTGCTTCTGTTATGCTGGTATCTGCTCAGCAATGGGAGAGCGACCAGTACATGTTAGGCAGTTTGACCAAAAAGCTGTAAGCTTGAAAGAAGAGCTAGCAAGAGTTTGCCCAGAGCTGGAAGAAATGCAAGAAAGGAAGTCTGAGCGTAGAAATCAATTTATAGAAGTTCAAGAACAGATTCAAAGTATCACAAATGAGATTTATAGTCCAAGTATTACAGCTTCTGTAGATGAAACTGATTTATCATTGAGAAAGCTTGAAGAATTCCAGACAGCTTTTTGCATTTCAAAAGGAGAAGTGTGTGTAAATCAATTTAAACCATCATGTATTGTTCTTTGTTACTTTCCATGCAAAATAGTCAGTGGAATCCATCCTAGCTTAGGAAATTCAGAGGGACCTAGGAGTGTAAATAATGATACCATTAATCAATTGCCAATTGCTATACAAGACCTGCAAAAAGTTAAATTACAGAGAATGCAAAGGCTCCAAGATCCAGCTTCAACAATGTTGGAGCTCTGGAATTTGATGGATACACCTCTGGAAGAGCAACGGATGTTTCAGAATTTTACTTTATATACGTTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAAGAAAAGAGCAGAGCTTGAGGAGATTTGTCAAAAGACTCATTTGATTCCAGAAATTGATAGTGCAGTGAAATATGTTGTTGAAGCTACAGAATCTGGATCTGTGGACCCTGCTATTGTGCTTGAACAAATTGAACTTCAGATTGCCCAAGTAAAAGAGGAAGCTTTTGTCAGAAAAGAAATACTTGAAAAAGTTGAGAAATGGTTGTCAGCATGTGATGAAGAATATTGGCTTGAGGAGTACAACAGCGACGAAAATCGATACAATGCTGGGAGAGGTTCTTATCTTACTCTCAAGCGAGCCAAGAAAGCCTGTGCCCTGGTTAAAAAACTTCCAGCAATGGTAGATGCTTTAACTTCAAAAACTGTAGCATCAGAAAAGGACAAAGGCATTGAGTTCACATATGATGGTACCTGTCTGGTCTGTATGCTTGAGAACTACTCCCTATCACGGCAAGAGAAGGAGCAAGAGCGTTGTAGGCAGTGGGAACTGAAGAAACTTCAGGGACAAATAATAGTGGAAAAGGAGTTAACTTCTTTTAGATCTACTCCCTCCCCCCCCTCTCCAGTTTTCCGTGCCTCTGGCTTGCAGAATTCTCACTTGGTATTTGCTAGAAGAGGAGAATATTGCTGGTGTTCCTATGAGAAAATACTCTACCGGTGCTGGAAGTGTGTTCCTGACGTGGTATCTCCTTTGACTCGACAACCTTTTTGTCCCATCTCTTCAACAGTATCGTCGAAAGCGAATGTTGCATTTGCTGCAAATGATACACATAATGAGAAGTTGCAGAAAACATTAGTAGTTAGCAATTTTCCATCCATCACTACTTCAAAGACAACCACAGTGGTGGATAAGAGAACAAAACTCCAAAGGGCAGTATCCATTCCTGACCCCACTACACCATAG 1581 0.3985 MVLTDYRSNTGRIMWHFQCFCYAGICSAMGERPVHVRQFDQKAVSLKEELARVCPELEEMQERKSERRNQFIEVQEQIQSITNEIYSPSITASVDETDLSLRKLEEFQTAFCISKGEVCVNQFKPSCIVLCYFPCKIVSGIHPSLGNSEGPRSVNNDTINQLPIAIQDLQKVKLQRMQRLQDPASTMLELWNLMDTPLEEQRMFQNFTLYTLEELKSSKMKELVLKKRAELEEICQKTHLIPEIDSAVKYVVEATESGSVDPAIVLEQIELQIAQVKEEAFVRKEILEKVEKWLSACDEEYWLEEYNSDENRYNAGRGSYLTLKRAKKACALVKKLPAMVDALTSKTVASEKDKGIEFTYDGTCLVCMLENYSLSRQEKEQERCRQWELKKLQGQIIVEKELTSFRSTPSPPSPVFRASGLQNSHLVFARRGEYCWCSYEKILYRCWKCVPDVVSPLTRQPFCPISSTVSSKANVAFAANDTHNEKLQKTLVVSNFPSITTSKTTTVVDKRTKLQRAVSIPDPTTP 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01665 526 Coils Coil 57 77 - -
Gma16g01665 526 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 449 495 IPR007145 GO:0000226|GO:0008017
Gma16g01665 526 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 23 411 IPR007145 GO:0000226|GO:0008017
Gma16g01665 526 Gene3D - 272 404 - -
Gma16g01665 526 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 449 495 - -
Gma16g01665 526 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 23 411 - -
Gma16g01665 526 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01665 Gma-Chr16 37687318 37692294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01665 25 405 EF-hand Containing Proteins AT5G62250 48.485 5.76e-110 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01665 K16732 - gmx:100777734 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01665 16 37687318 37692294 Gma09g01469 09 39370444 39377702 GST
Gma16g01665 16 37687318 37692294 Gma10g01735 10 44513550 44519665 PCT
Gma10g01735 10 44513550 44519665 Gma16g01665 16 37687318 37692294 PCT