Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01662 ATGAGTTTTGCGGCGTACAAGATGATGCAGTGCCCCACCGGCATCGACAACTGCGCCGCCGGGTTCCTCACCCACTCCCGCTCTGACTTCGTCCCTCTCCAGCCCGACGACCTCGACGCCGAGTGGCCCTCCCGCCCCCGCCACCACGTCGGCTCCCTCCCCAACCTCGTCGTCACCGCCGCCAACGTCCTCGAAGTCTACGCCGTCCGCCTCCAGGAGGACCAGCCGCCCAAGGCCGCCGCCGACTCCCGCCGCGGCGCCCTCCTCGACGGCATTGCCGGGGCCTCCCTCGAACTCGTGTGCCACTACAGGTTGCATGGTAATGTTGAAACCATGGCTGTTTTGAGCATTGGAGGTGGTGATGTTTCTAGGAGGAGAGATTCTATCATGTTAACTTTTGCAGATGCAAAGATTTCAGTTCTTGAGTATGATGATTCTATTCACGGACTTCGTACTAGTTCTTTGCATTGTTTTGAGGGTCCTGAATGGCTTCATCTGAAAAGAGGAAGAGAACAATTTGCAAGAGGACCAGTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGTGGAGTTCTTATCTATGATTTGCAAATGATAATACTAAAGGCTACTCAGGCTGGTTCTGGTTTAGTTGGGGAGGATGATGCCTTGGGATCTTCAGGAGCAGTTGCTGCTCGTATTGAGTCATCTTATATGATAAACCTACGTGACTTGGATATGAGGCATGTAAAAGATTTTACGTTTGTTCATGGCTATATTGAACCTGTAATGGTGATTTTGCATGAACGTGAACTCACTTGGGCCGGGCGTGTCTCATGGAAGCATCATACTTGCATGATATCAGCACTTAGTATCAGCACAACTTTGAAGCAGCATCCACTTATTTGGTCAGCTGTTAATCTTCCCCATGATGCGTACAAGCTTCTTGCAGTGCCCTCGCCAATAGGTGGTGTTCTTGTAATTAGTGCTAACACTATTCATTATCACAGTCAGTCTGCTTCTTGTGCATTGGCCTTGAACAGTTATGCTGTTACACTTGACAGTAGTCAAGAGATACCAAGATCAAGTTTCAATGTGGAGCTTGATGCTGCCAATGCAACTTGGTTGTTAAGTGATGTGGCCTTGCTGTCAACAAAAACTGGTGAACTGCTATTGCTTACGCTTGTTTATGATGGAAGGGTTGTACAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTCTGTCATCTGGTATTACAACAATTGGAAATTCTCTGTTTTTCCTCGCCAGTCGGTTAGGGGACAGTATGCTAGTGCAATTTTCTTGTGGATCAGGTGTTTCCATGTTGTCATCCAATCTAAAAGAAGAGGTTGGTGATATTGAAGCAGATGCTCCATCAAAGAGATTGCGAAGGTCTCCTTCTGATGCTTTGCAAGATATGGTTAGTGGTGAGGAGCTCTCCTTGTATGGGTCTGCTCCAAATAGAACAGAATCAGCACAGAAATCCTTCTCGTTTGCAGTGAGGGATTCATTGATTAATGTTGGTCCTTTGAAAGATTTCTCATATGGTTTAAGAATAAATGCTGATGCAAATGCTACAGGGATAGCCAAACAGAGTAACTATGAATTGGTGTGCTGTTCTGGTCATGGAAAAAATGGTTCTCTTTGTGTTTTGCGGCAATCAATTCGCCCAGAAGTGATTACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTGTATCATAAGAGCACACGCTCTCATAATGCTGATTCTTCTAAGATGGCTGATGACGATGATGAGTATCATGCTTACCTTATTATTAGTTTGGAGGCTCGTACTATGGTACTAGAAACTGCTGATCTTCTGAGTGAGGTTACTGAAAGTGTGGACTACTATGTTCAAGGAAAAACACTTGCTGCGGGGAATTTATTTGGAAGGTGTCGAGTTATCCAAGTCTATGAACGTGGTGCTCGAATTCTAGATGGTTCTTTTATGACCCAAGATGTAAGCTTTGGAGCTTCTAATTTGGAATCTGGTTCTGCATCTGACAGTGCTATAGCACTTTCTGTTTCTATAGCTGATCCATTTGTCTTGCTCAGGATGAGTGATGGAAGTATTCGACTTCTGATTGGAGATCCTAGTACCTGCACTATCTCTGTCACTTCTCCAGCTTCATTTGAGAGCTCCAAGGGATCAGTTTCTTCATGTACACTGTACCATGATAAAGGACCTGAGCCTTGGCTGAGGAAAACTAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGACTATTGATGGCACTGATGGTGCAGCTCAGGATCATGGGGATATTTATTGTGTTGTTTGTTTTGATAATGGTAACCTTGAAATATTTGATGTCCCCAATTTCAATTGTGTCTTTTCTGTGGAAAATTTTATGTCTGGAAAGAGCCATCTTGTTGATGCTCTGATGAAAGAGGTACTGAAAGATTCTAAACAAGGGGATAGAGATGGAGTGATCAACCAAGGGAGGAAGGAAAATATACCGGATATGAAGGTTGTAGAGTTGGCCATGCAGAGATGGTCTGGGCAGCATAGCCGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACTATTCTTTGTTACCATGCTTACCTTTATGAAAGTCCAGATAGTACTTCTAAAGTTGAGGATTCAGCATCAGCCGGAGGATCCATTGGCCTTAGCAGTACCAATGTTTCCAGGCTTAGAAATTTGAGATTTGTTCGTGTGCCTTTGGATGCATATGCCAGGGAGGATACATCAAATGGACCACCTTGTCAACAAATTACTATTTTCAAGAATATTGGTAGTTATGAAGGATTCTTCCTATCAGGGTCAAGACCAGCTTGGGTTATGGTGTTGAGGGAACGACTTCGTGTTCATCCACAGCTATGTGATGGGTCTATTGTTGCTTTTACTGTCCTTCACAACGTGAACTGCAATCAAGGACTTATATATGTTACATCACAGGGTGTTTTGAAGATATGCCAGTTGCCTTCTGGCTCAAACTATGACAGCTACTGGCCTGTACAAAAAATTCCACTAAAAGCCACACCACACCAAGTAACATACTTTGCGGAGAAGAACTTATATCCACTTATTGTCTCATTTCCTGTTCTTAAGCCACTAAATCAAGTTATTTCTCTGGTTGACCAAGATATCAACCATCAAAATGAGAGTCAGAATATGAATCCTGATGAGCAAAACCGCTTTTATCCTATTGATGAATTTGAGGTTCGTATTATGGAGCCAGAAAAGTCTGGTGGCCCTTGGCAAACTAAGGCAACAATACCTATGCAAAGTTCTGAAAATGCCCTTACTGTGAGGATGGTTACTTTAGTGAATACAACCTCAAAAGAAAATGAAACACTTTTAGCCATTGGTACTGCTTATGTGCAAGGAGAGGATGTTGCTGCAAGAGGACGTATCCTATTGTTCTCTTTGGGGAAAAATACTGATAATCCACAAACTCTGGTTTCAGAGGTGTACTCTAAGGAATTAAAAGGTGCTATATCTGCCTTGGCCTCTCTTCAAGGCCATCTATTAATAGCATCTGGTCCAAAAATTATTCTGCACAAGTGGAATGGCACTGAGTTGAATGGTATTGCATTTTTTGATGCACCACCATTACATGTTGTGAGCTTAAATATTGTAAAGAACTTCATCCTTATTGGCGATATCCATAAAAGCATATACTTTCTTAGTTGGAAAGAGCAGGGTGCTCAATTGAGCTTATTAGCCAAGGATTTTGGCTCTCTCGATTGTTTTGCGACAGAATTCTTGATTGATGGAAGTACTCTCAGTCTCATGGTTTCAGATGATAATAGAAACATCCAGCAGATTTTTTACTATGCCCCAAAGATGTCTGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCTGAATTTCATGTTGGTGCCCATGTGACTAAATTCTTAAGGTTGCAAATGTTATCCACTTCGGATCGAGCTGGTGCTGTACCAGGCTCAGATAAAACCAATCGTTTTGCCTTATTATTTGGTACCTTGGATGGAAGTATTGGTTGCATTGCGCCTCTTGATGAAATCACATTTCGCAGACTGCAGTCTTTGCAGAGAAAACTTGTTGATGCTGTACCCCATGTCGCTGGCCTGAACCCCAGAGCTTTTAGACTATTTCGGTCAAATGGAAAGGCCCATCGGCCTGGCCCTGACAGTATAGTTGATTGTGAGCTGCTATGCCATTATGAAATGCTTCCATTGGAGGAACAGCTTGAAATTGCTCACCAGGTTGGAACAACTCGATCACAAATTCTGTCAAATCTAAGTGATCTGTCTCTTGGAACAAGCTTCTTGTGA 4347 0.4334 MSFAAYKMMQCPTGIDNCAAGFLTHSRSDFVPLQPDDLDAEWPSRPRHHVGSLPNLVVTAANVLEVYAVRLQEDQPPKAAADSRRGALLDGIAGASLELVCHYRLHGNVETMAVLSIGGGDVSRRRDSIMLTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVKVDPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDALGSSGAVAARIESSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNSYAVTLDSSQEIPRSSFNVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEVGDIEADAPSKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKMADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRCRVIQVYERGARILDGSFMTQDVSFGASNLESGSASDSAIALSVSIADPFVLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGETIDGTDGAAQDHGDIYCVVCFDNGNLEIFDVPNFNCVFSVENFMSGKSHLVDALMKEVLKDSKQGDRDGVINQGRKENIPDMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLYESPDSTSKVEDSASAGGSIGLSSTNVSRLRNLRFVRVPLDAYAREDTSNGPPCQQITIFKNIGSYEGFFLSGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNQGLIYVTSQGVLKICQLPSGSNYDSYWPVQKIPLKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVISLVDQDINHQNESQNMNPDEQNRFYPIDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLVNTTSKENETLLAIGTAYVQGEDVAARGRILLFSLGKNTDNPQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDNRNIQQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRAGAVPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRLFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLSDLSLGTSFL 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01662 1448 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 2 1439 - -
Gma16g01662 1448 Gene3D - 969 1355 IPR015943 GO:0005515
Gma16g01662 1448 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 2 1439 - -
Gma16g01662 1448 Gene3D - 51 444 IPR015943 GO:0005515
Gma16g01662 1448 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 128 687 IPR018846 -
Gma16g01662 1448 Pfam CPSF A subunit region 1080 1413 IPR004871 GO:0003676|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01662 Gma-Chr16 37646398 37666604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01662 K14401 - gmx:100785543 2863.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01662 16 37646398 37666604 Gma16g01662 16 37646398 37666604 ECH
Gma16g01662 16 37646398 37666604 Gma09g01465 09 39297330 39319478 GST