Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01659 ATGACCCAGAGCAGAAAGCCCAGAAAGCCCAACCCGCAAGCCCGCGAAGCCCAACAGAACCACCCTTCTTCTTCGTTCTCCAGCTCCGGCATGAAACTCATCGTCCCCCTCCAGGGCGTGGTTCAGGGACGCGGAGGCCTTCTCCTCGGGACTCTCGTCCCCTGCGCGCTCTTCTACTTCCTCCAGCTCTACCTCAAACGACGCCGTTCCAACTTCTCCCCTCCCTCCCCCTCCGAACCCACCCTCCCACGCACCTCCTCCCGCTCCAGTTTGTCGACACGTGGCTCCATTTCCCGTGTCCGGGTCTCCAAGCTCGCCACGCAGATTTCCAGACCCGACGAGTCGCTCTATTACGTCGGGTTGGAGAGGGTTTCGCGAGATCCCTACGACGCGTTGGAGAATCCCAATGGGATTATTCAGTTGGGCTTGTCGGATAACAAGCTGTGCTTGGATTTGATAGGGGAATGGGTGGCACGGAACTTGGAAGGGTCCATCAGTGGCGGTGTTGGTCTGGGAATCAATGGGATTGTGCCGTATCAGACGTTTGATGGGGTCATGGAATTGAAAATGGCTTTGTCAGATTTTATGCATCAGGTGATTGGGGGATCAGTGAAATTTGACCCATCTAACATGGTACTAACAGCTGGGGCAACTCCTGCAATTGAGATATTGTCCTTCTGTTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCTGGCTTTGACAGAGATGTAAGATGGCGTCCTGGGGTAGACCTAATACCTGTTCATTGTCGCAGTACTGACAATTTCGATTTAAATATCACTGCTCTTGAACAAGCATTTAGTCAAGCAAGAAAACGAGGAGTCAAAGTTCGTGGAATTCTAATTTCCAACCCTTCAAATCCTGTTGGCAATATGATGACACAAGACATGCTTTACAGTCTTTTAGACTTTGCTGAAGAGAAAAATATTCATATCATTGCTGATGAAGTATTTGCAGGCTCCACGTATGGAAGTGAGAAGTTTGTGAGCATAGCTGAAATTCTTAATTCAGATTATATAGACAAGAGCCGGGTCCATATAATATATGGTCTGTCAAAAGACCTTTCGCTTGCTGGCTTTAGAGTCGGGGTTATATGTTCATTCAATGAGAGTGTTTTGGCTGCTGCCAAGAAGTTGAGTAGATTTTCCTCTATATCCGCTCCGACCCAGAGGTTAGTTACTTCAATGCTTTCAGATAAAAGATTTATTCGGGAGTACTTTGAAACCAACCAGAAAAGAATACGACAAGTGCACGATGAATTTGTGGGTTGTTTAAGTAAACTAGGAATCAAGTGTGCCAAGAGCAGTGCTGGTATGTACTGTTGGGCTGATATGAGTGGATTAATCCGACCTTATAGTGAGAAAGGAGAAATTGAATTATGGGAGAAGTTTTTGAGTGTTGCTAAGATCAATATAACTCCTGGGTCAGCCTGCCATTGCATAGAACCAGGATGGTTTAGGATTTGTTTTACCACTATAACATTAGAGGAGATCCCTTTGGTAATTGAACGAGTTAGGAAAGTTGTTGAAAGTTGTGATTCTTCTAGTTGA 1587 0.4638 MTQSRKPRKPNPQAREAQQNHPSSSFSSSGMKLIVPLQGVVQGRGGLLLGTLVPCALFYFLQLYLKRRRSNFSPPSPSEPTLPRTSSRSSLSTRGSISRVRVSKLATQISRPDESLYYVGLERVSRDPYDALENPNGIIQLGLSDNKLCLDLIGEWVARNLEGSISGGVGLGINGIVPYQTFDGVMELKMALSDFMHQVIGGSVKFDPSNMVLTAGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVRWRPGVDLIPVHCRSTDNFDLNITALEQAFSQARKRGVKVRGILISNPSNPVGNMMTQDMLYSLLDFAEEKNIHIIADEVFAGSTYGSEKFVSIAEILNSDYIDKSRVHIIYGLSKDLSLAGFRVGVICSFNESVLAAAKKLSRFSSISAPTQRLVTSMLSDKRFIREYFETNQKRIRQVHDEFVGCLSKLGIKCAKSSAGMYCWADMSGLIRPYSEKGEIELWEKFLSVAKINITPGSACHCIEPGWFRICFTTITLEEIPLVIERVRKVVESCDSSS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01659 528 Pfam Aminotransferase class I and II 140 517 IPR004839 GO:0009058|GO:0030170
Gma16g01659 528 Gene3D - 161 411 IPR015421 GO:0003824
Gma16g01659 528 SUPERFAMILY PLP-dependent transferases 110 522 IPR015424 -
Gma16g01659 528 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 20 525 - -
Gma16g01659 528 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 141 167 - -
Gma16g01659 528 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 173 189 - -
Gma16g01659 528 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 210 230 - -
Gma16g01659 528 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 232 253 - -
Gma16g01659 528 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 286 310 - -
Gma16g01659 528 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 322 345 - -
Gma16g01659 528 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 356 380 - -
Gma16g01659 528 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 388 411 - -
Gma16g01659 528 MobiDBLite consensus disorder prediction 72 95 - -
Gma16g01659 528 PANTHER AMINOTRANSFERASE ACS12-RELATED 20 525 - -
Gma16g01659 528 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 362 375 IPR004838 GO:0003824|GO:0009058|GO:0030170
Gma16g01659 528 Gene3D Aspartate Aminotransferase, domain 1 127 516 IPR015422 GO:0003824
Gma16g01659 528 MobiDBLite consensus disorder prediction 1 29 - -
Gma16g01659 528 CDD AAT_like 179 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01659 Gma-Chr16 37618166 37621595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01659 K14270 - gmx:100800539 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01659 16 37618166 37621595 Gma16g01659 16 37618166 37621595 ECH
Gma16g01659 16 37618166 37621595 Gma09g01462 09 39253479 39257524 GST