Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01622 ATGATGAAAATGAAAAATATCAATAGTAGTAATAACAATAAGACAAATGGTCTTTCTTCCATCATTAACAATGGAGGTTCAGATGGTAACAGAGCCGAGCCTGGTTCAAAGGAATGGGAGATGAGGCCAGGTGGAATGCTGGTTCAGATGAGAACAACTGACTCGGATCGGAACTCAGCACTTGTGCCCACAATTAGAGTTAGGGTCAAATATGGTTCAATTTATCATGAAGTCAACATTAGTTCACAAGCTACATTTGGGGAGTTGAAGAAAATGCTGTCTGGGCCAACTGGGTTACACCATGAAGATCAAAAGCTGTTATACAAAGACAAGGAGAGGGATTCAAAGGCTTTTCTTGACATGGTTGGGGTGAAGGACAAATCCAAGATAGTGCTAGTGGAAGACCCTATTAGTCAAGAGAAGAGGTTGTTAGAGAGAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGACGGGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAGAGTTGTGGAAACAGATTTGCTTAATCTGATTGAGTTATTGATGAATCAATTGCTTAAATTGGATGGTATAGTAGCTGATGGGGATGTCAAATTACAGAGGAAAATGCAGGTAAAAAGAGTTCAAAAGTATGTTGAAACTCTGGATGTGCTGAAAGTTAAGAATTCCATGCCTAGTAGCAATGGAGGCCATGCCCCAGTGCAGCCTCAACAGAAGCATTCAAATGGGCAAAGGCAGGGACCAGTTCAAGAGAAAAAACAACAAAAGCATTCAAATGGACATCATAGATTGGCCTTAGCACCAATTCAGGAGCAGGAACAACAACAACCCTCAAGGAATTCCACCTCAGGAGTTGTAGTTACCACAAATTGGGAATTGTTTGATTCTGTCCCACCATTAATCCCTGTGCCATCCACATCCCCATCACCACACCCCCCGGTGACCAATAATTCAGGTCCTCACAAGTTCAATTGGGAATTCGTCAACCAATTACCATAG 1050 0.421 MMKMKNINSSNNNKTNGLSSIINNGGSDGNRAEPGSKEWEMRPGGMLVQMRTTDSDRNSALVPTIRVRVKYGSIYHEVNISSQATFGELKKMLSGPTGLHHEDQKLLYKDKERDSKAFLDMVGVKDKSKIVLVEDPISQEKRLLERRKNAKMEKAAKSISEISLEVDRLAGRVSAFESIISKGGRVVETDLLNLIELLMNQLLKLDGIVADGDVKLQRKMQVKRVQKYVETLDVLKVKNSMPSSNGGHAPVQPQQKHSNGQRQGPVQEKKQQKHSNGHHRLALAPIQEQEQQQPSRNSTSGVVVTTNWELFDSVPPLIPVPSTSPSPHPPVTNNSGPHKFNWEFVNQLP 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01622 349 MobiDBLite consensus disorder prediction 1 40 - -
Gma16g01622 349 MobiDBLite consensus disorder prediction 1 30 - -
Gma16g01622 349 ProSiteProfiles BAG domain profile. 158 236 IPR003103 GO:0051087
Gma16g01622 349 ProSiteProfiles Ubiquitin domain profile. 63 133 IPR000626 GO:0005515
Gma16g01622 349 MobiDBLite consensus disorder prediction 238 266 - -
Gma16g01622 349 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 3 1 328 - -
Gma16g01622 349 MobiDBLite consensus disorder prediction 238 278 - -
Gma16g01622 349 Gene3D - 64 134 - -
Gma16g01622 349 MobiDBLite consensus disorder prediction 320 339 - -
Gma16g01622 349 Pfam Ubiquitin family 75 133 IPR000626 GO:0005515
Gma16g01622 349 CDD Ubl_AtBAG1_like 64 133 - -
Gma16g01622 349 SUPERFAMILY BAG domain 118 240 IPR036533 GO:0051087
Gma16g01622 349 Gene3D BAG domain 135 240 IPR036533 GO:0051087
Gma16g01622 349 PANTHER BCL2-ASSOCIATED ATHANOGENE 1 328 IPR039773 GO:0051087
Gma16g01622 349 SUPERFAMILY Ubiquitin-like 54 139 IPR029071 -
Gma16g01622 349 Pfam BAG domain 159 233 IPR003103 GO:0051087
Gma16g01622 349 SMART BAG_1 158 236 IPR003103 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01622 Gma-Chr16 37098395 37100890 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01622 - - gmx:100818492 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01622 16 37098395 37100890 Gma16g01622 16 37098395 37100890 ECH
Gma16g01622 16 37098395 37100890 Gma09g01407 09 38007623 38010222 GST