Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01609 ATGCGAGTCTTTGCCTCTCGAACCTCCAATCTCTTCAAGCTCAATGTCGAGCACTTTCTACTAATCCACAACCCTAATTTCAACTCCGTCAGAGAATTCTCGCAATCCACCGCAATCCCCAAAAAGCAACTTAGGGTTCGCGACCATGGCTATGACAACTACATGGAAGTCGAGAAGAAAACGCGCAAGGTCCTAAAATTCCAGAACCTCATCCTCTCGGAACCTTCCCAATCGCTCCCAATCTCGCGCCTTGAGACGCTTGCGCGGCGCTTCGGCTTCACGCGCCACGAGTCCGGCGCGTTCGTCCTCAAGTTCCCGCACGTGTTCGAAATCTTCGAGCACCCTGTGCAGCGCATCCTTTTCTGCCGCCTCACCCGCAAGGCCATCCTCCAGATCGAGCAGGAGCGTCGTGCACTAGCCGCGGAGCTCCCACGCGCTGTCACGCGCCTCCGGAAGCTCCTCATGATGTCGAACCATGGCCGCCTCCGCCTCGAGCACGTGCGCATCGCACGCGCCGCGTATGGGCTCCCGGACGACTTTGAAAACTCGGTGGTGCTGAGGTACCCTCAGTTTTTCCGTTTGATTGATGCTAAGGAAACTAGGAACAAGTACATTGAGGTTGTGGAGAGAGACCCTGGGTTAGGAACTTGTGCAATTGAGGAAGCTAGGGAAAGGGTTTATAGAGAGAGAGGAAGTGATGCTGAGGATATTAGGTTTTCTTTTGTGATTGATTTTCCACCTGGTTTTAAGATTGGTAAGTATTTTAGGATTGCAATGTGGAAGTGGCAGAGGCTTCCTTATTGGTCCCCTTATGAGGATGTTTCCGGGTATGATTTGAGGTCCATTGAGGCCCAGAAGAGGATGGAGAAGAGGGCTGTTGCCACCATTCACGAGTTGTTGTCCTTGACTGTGGAGAAGAAGATTACGCTGGAGAGGATTGCGCATTTCCGGATGGCCATGAACCTGCCCAAGAAGTTGAAGGATTTTTTGCTGCAGCACCAGGGGATTTTTTATGTCTCCACAAGGGGGAATCAGGGAAAGCTTCACACTGTTTTCCTTAGGGAGGCATATAGGAAGGGCGAGCTGATCGAGCCGAATGAGTTGTATTTGGCGCGGAGGAAGCTGGCCGAGCTTGTCCTGTTGAGCCCTCGGAAGGCTAAGGTTGATGGGGAGTTGGTTGGGTATAGGAGAAGCAGGTTAGAGGATGAAATGGGGCAGGTAACTAGAGCATATGTGGAGGATGCTTGTGAAGACTTTAAGGGCAAAGATGATTCGGGGCGGGATAAGGATGCAGAGGATGATTTGACATCAGATATAGGCTCCGATGTTGATTTGGGAGATGAGGATGATGATTGTGTGGATAATGTGTCGTTGCAGAGGAAATCTTAG 1389 0.5133 MRVFASRTSNLFKLNVEHFLLIHNPNFNSVREFSQSTAIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQNLILSEPSQSLPISRLETLARRFGFTRHESGAFVLKFPHVFEIFEHPVQRILFCRLTRKAILQIEQERRALAAELPRAVTRLRKLLMMSNHGRLRLEHVRIARAAYGLPDDFENSVVLRYPQFFRLIDAKETRNKYIEVVERDPGLGTCAIEEARERVYRERGSDAEDIRFSFVIDFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKKLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNELYLARRKLAELVLLSPRKAKVDGELVGYRRSRLEDEMGQVTRAYVEDACEDFKGKDDSGRDKDAEDDLTSDIGSDVDLGDEDDDCVDNVSLQRKS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01609 462 MobiDBLite consensus disorder prediction 420 436 - -
Gma16g01609 462 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 442 IPR045040 GO:0003723
Gma16g01609 462 MobiDBLite consensus disorder prediction 420 462 - -
Gma16g01609 462 MobiDBLite consensus disorder prediction 437 452 - -
Gma16g01609 462 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 23 442 IPR040295 -
Gma16g01609 462 Pfam Plant organelle RNA recognition domain 46 382 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01609 Gma-Chr16 36961933 36963421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01609 - - gmx:100782167 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01609 16 36961933 36963421 Gma16g01609 16 36961933 36963421 ECH
Gma16g01609 16 36961933 36963421 Gma09g01381 09 37306533 37307727 GST