Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01597 ATGGAGGAGCCGAACTCCGATTGCTGGCTGCCACCAGGTTGGACTGTGGAAGTGAGGGTGAGAAAGAATGGTAAGAGAGACAAGTATTACTTCCCCCCCTCAAGTGGACTAAAATTCAATTCCAAGGTGGAGGTATTTCGCTATCTTGACAATGCTCAGAACAAAGTCAGCATCCAGAAAATCTCTCCTAATGTTATAGTTGAGAAAGCTATTGCGGAAGGGTTACCACCAGGATGGGTGAAAAAGACCAGAATCACAACAAATGGAGATTCAGTTAGAAGAGATACGTTCTATATTGACCCTGTAAATGGTTATACATTCTGCTCAATAAAAGATGTTGATTGCTATCTTGAATCTGGAGAGATAGGAAGCTACGAATTCAAGTCAAAAGACAATGATGGCACTGATATGGAGTTAAAAGCTGACAAATCTCCTTCAACAAGTGTAACCGTGAAACCAACATTATCAATTAGCATGGGTCAAAGCTCAGACATGGACATGATAGCTAATGACCAACAGATTCCAAGATCTGCAAGTTCTGAAGAATATATGTCTGTGCCCATCTCTGAATGTATTTCCAATCAGTGTGTCGTGGGCGCCAAACTGACCAGTTCAGTTCTATCACTGGCTAAAAGTTCAGATAAAAAACAAGGGAAGGTTGGTGTAGCTCAAAGCGCTTCGGTTTCTGGTTGCACTAACAAAGATGCCGAAGAAAAGCAACTTCAAGAAAATTCAGAGACAAAACATGGCACTGAAAAAGCCCAGGCCAAAGATCCCCAGTGCAAAAACAAGCACAAGAAAGAGATCAATTTGCCTCGCCGTGCTTCAAAGCGTCTTGCTGGAATTAAGGTTGATCCTGTTCCGGAACTTAAAATAAGAAATAGAGCACGCCGTGTTGCAGTTAAACAATCAGAGGAGGAGGAAACCATCACAAATGTAGATAAATCTGCCAACAGCTTGCTTGATGGTCTAGCAAAACAGAAATTAAATAACGAGGATACTGACAAGACTCTAGAAGTGCAAAGAAGCGACAAGGAAAAAGAATGCTTCTCTTTTTCGTCTCTGGAGAACAATGCTACTGTGGAAGAGTGTGTGAGAGTCATTGAAAATGGAGATAAAGTTGATGCTAAGTTAGATTACACCCTTGACTTTCCCCTCAGAGAACTACTAACAGACCCTTGTATTGCATTTGCCATTCAAACACTCACTGGAGTAACATTCGAAGCCTCCAAAGACTTACAAACTTTTTCCGAGTTAAAAAACAGCCAGCATTCCAAAACTTCTGCTTCTGCCGCCGCCATTGGCGAAGGCGATGGTAAGAAAAGCAATGATGGGTTAGGTGGCAATGAGTTCTCATCTCCAGAGAACCTTTCTATTCCACCAGAACATGCTGGTGATGCCAAAACTGATTTAAAGGCCAAGAATGAGAATGCAGGACCATCTTCTGAAAAGACACTTGACATGTCATCATGGATGGATCCATGCATTGAATTTGCTATAAAAACTCTCACTGGCACCATCCCATCAGACTCTGCTGATCAAAATCCCAAGAACTGCCTCCAACAGCAACTCAGCTCATCAAATAGCCAACACAGTGAGATGGCCTTGTCAAGTGTCAGTTTAGATAACATATACAAAACTGACTACTCTTGCAGCCAATACTTTGACACACAGAAACCAATGTTTAATAAACAGTCTTTTGTGGATCCATCACTGCAGCACACCAGAAATATAGAATCTTCCCATCGTGTGACATCAAAGTGGTAG 1767 0.4188 MEEPNSDCWLPPGWTVEVRVRKNGKRDKYYFPPSSGLKFNSKVEVFRYLDNAQNKVSIQKISPNVIVEKAIAEGLPPGWVKKTRITTNGDSVRRDTFYIDPVNGYTFCSIKDVDCYLESGEIGSYEFKSKDNDGTDMELKADKSPSTSVTVKPTLSISMGQSSDMDMIANDQQIPRSASSEEYMSVPISECISNQCVVGAKLTSSVLSLAKSSDKKQGKVGVAQSASVSGCTNKDAEEKQLQENSETKHGTEKAQAKDPQCKNKHKKEINLPRRASKRLAGIKVDPVPELKIRNRARRVAVKQSEEEETITNVDKSANSLLDGLAKQKLNNEDTDKTLEVQRSDKEKECFSFSSLENNATVEECVRVIENGDKVDAKLDYTLDFPLRELLTDPCIAFAIQTLTGVTFEASKDLQTFSELKNSQHSKTSASAAAIGEGDGKKSNDGLGGNEFSSPENLSIPPEHAGDAKTDLKAKNENAGPSSEKTLDMSSWMDPCIEFAIKTLTGTIPSDSADQNPKNCLQQQLSSSNSQHSEMALSSVSLDNIYKTDYSCSQYFDTQKPMFNKQSFVDPSLQHTRNIESSHRVTSKW 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01597 588 SMART TAM_2 3 73 IPR001739 GO:0003677
Gma16g01597 588 Gene3D - 63 159 - -
Gma16g01597 588 SUPERFAMILY DNA-binding domain 73 127 IPR016177 GO:0003677
Gma16g01597 588 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 1 582 - -
Gma16g01597 588 MobiDBLite consensus disorder prediction 507 531 - -
Gma16g01597 588 MobiDBLite consensus disorder prediction 236 266 - -
Gma16g01597 588 Pfam Methyl-CpG binding domain 4 57 IPR001739 GO:0003677
Gma16g01597 588 Pfam Methyl-CpG binding domain 75 121 IPR001739 GO:0003677
Gma16g01597 588 MobiDBLite consensus disorder prediction 418 487 - -
Gma16g01597 588 MobiDBLite consensus disorder prediction 213 267 - -
Gma16g01597 588 MobiDBLite consensus disorder prediction 213 235 - -
Gma16g01597 588 PANTHER OS04G0193200 PROTEIN 1 582 IPR038945 -
Gma16g01597 588 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 70 IPR001739 GO:0003677
Gma16g01597 588 SUPERFAMILY DNA-binding domain 7 54 IPR016177 GO:0003677
Gma16g01597 588 Gene3D - 2 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01597 Gma-Chr16 36808390 36813599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01597 - - gsj:114388973 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01597 16 36808390 36813599 Gma16g01597 16 36808390 36813599 ECH
Gma16g01597 16 36808390 36813599 Gma09g01351 09 36470185 36476451 GST