Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01572 ATGCCTTGCTCTTCCCTCACTTCCACTGGCGATAACAGCAGCAGCAGCAGCAGCAACAAGAAGAAGGATGGTTCTTCTCTCCGCGAGTTCAAGCTGAACGAATCAACCTTCTTAGCTTCGCTCATGCCTAAGAAAGAGATTGGCGTCGATCGCTTCTTCGACGCTCATCCCGAATACGACGGTCGCGGCGCTCTCATCGCTATCTTCGATTCTGGTGTAGACCCCGCTGCGGATGGATTACAGATTACCTCAGATGGGAAACCAAAAGTTCTTGATGTCATTGATTGCACAGGGAGTGGTGATATTGATACCTCAAAGGTGGTGAAGGCCGATTCTGATGGTCGTATTTGTGGTGCATCAGGGGCATCACTGGTTATCAATACTTCGTGGAAAAATCCTTCTGGTGAATGGCATGTTGGTTATAAATTAGTTTATGAGCTATTCACCGAAGGTGTGATATCTCGTTTGAAGAAAGAAAGAAAAAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCTAGGGCTGTAAAACAACTTGCTGACTTTGATCAGCAACAAATCAAGGTAGAGGATGTAAAACTTAAAATGTTCCGGGAAGATCTCCAGAATAGACTTGATATTTTGAGAAGGCAATCTGAGagctatgatgataaagggcctgtcatagatgctgttgtctggcatgatggagaggtttggagggctgcccttgacacacagagtctggaagatgatccaaattgtgggaagcttgctaattttatgcctttaactaattatagGAAAGAGAGGAAGTATGGCATCTTCAGCAAATTAGATGCTTGTACTTTTGTTGTTAATGTCTTCAGTGATGGGAATGTCTTAAGTATTGTAACAGACTGTTCTGCACATGCCACCCATGTTGCTGGTATAGCTACTGCTTTCCACCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACGGGTTTGATTCGGGCACTCATAGCAGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGCGAAGCAACATTACTGCCAGACTATGGGCGCTTTGTTGATCTTGTGAATGAGGTGGTGAACAAACATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGCGGGCCAGGATTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCCAGTATCATAGGTGTTGGCGCATATGTATCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCATCTGATGGGCTTGAATACACTTGGTCTAGCCGGGGACCAACAGCTGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCTGGTGGTGCTGTTGCTCCTGTCCCCACATGGACTCTTCAACGACGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCTTGTGGAGGAACTGCGTTGCTCATAAGTGCAATGAAGGCTGAGGGAATCACTGTGAGTCCATACAGTGTGAGGAAGGCGCTTGAAAATACCGCAATTCCCATAGGTGATTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGCCAAAATGTTCCATGTGTTTGGTATCAAATAAAAATCCAGCAATGCGGAAAAACAAGTCCTTCATCAAGGGGCATCTACCTTAGGGAAGCTAGTGCTTGCCAACAATCTACGGAGTGGACAGTGCAAGTTAATCCAAATTTTCATGAAGATGCTGACAACTTCAAGGATTTGGTTCCATTTGAGGAGTGCATTGAATTACATTCTACAGAAGAAACAGTTGTCAAGGCCCCTGACTATCTACTGCTCACTTATAATGGTCGCACCTTCAATGTAGTGGTGGATCCTTCCAATCTTTCTGATGGTCTTCATTATTTTGAGGTCTATGGTATTGACTGCAAAGCTCCATGGCGTGGTCCTCTGTTCAGAATTCCAATCACCATAACAAAGCCCAAGGCCATAACTAACCAGCCTCCACAAATTTCATTTTCAAAGATGTTGTTCCAGCCAGGCCATATAGAAAGGAGATACATAGAAGTGCCGCATGGTGCATCTTGGGCCGAAGTAACGATGAAAACATCAGGTTTTGACACAGCACGGAGATTTTATGTGGATGCTGTTCAGCTGTGCCCACTGCGAAGACCTTTGAAATGGGAGAGTTCTGTAAATTTTCCTTCTCCTGCTGCCAAAAGCTTTGCCTTTAGGGTAGTAAGCGGCCAGACATTGGAACTAGTCATTTCTCAGTTTTGGTCAAGCGGCATAGGGAGTCATGAGACCGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAGGTCAATCAAGAAGAGGTTTTACTTGATGGTAGTGACGCACCAGTCAGGATTGATGCTGAAACTCTACTGGCATCTGAGGAACTTGCACCTGTGGCAATTCTAAACAAGATTAGGGTCCCATATCGACCAATAGATTCTAAGATTATTGCACTTACAGCAGATCGTGACAAACTTCCTTCTGGAAAACAGATTCTGGCACTGACTCTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCTCACATACCTTTGCTAAATGACCGGATATATGACACTAAATTTGAGTCTCAATTTTATATGATTTCTGACTCAAATAAGCGCGTATATTCAAGTGGAGATGTCTATCCAAGCTCTTCTAATCTTCCCAAGGGAGAATATATTTTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTCATTCGGCTAAGCTTTTTCTCTCAACCCGATGGCTCGCTGATGGGAAATGGTTCCTTTAAGTCCTCATCACTAGTTCCAGGTATAAAAGAAGGAATATATCTTGGTCCACCACCAAAAGAAAAGCTTCCCAAGAATTCTCCACAAGGATCTGTTTTGCTAGGGGCAATTTCATATGGGAAGCTGTCCTTTGTTGGTCAGGGAGAGAATAAAAGTCCCGAAAAGCACCCTGCATCATATCAGATTTCTTATATAGTTCCCCCAAATAAGATTGATGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGAATGTTTCAGAACGTTTAAAAGAAGAGGTAAGAGATGCAAAAATAAAAGTTCTAGCAAGCCTAAAACAAGAAACTGATGAAGAGCGTTTGGAGTGGAAAGAGCTATCTGCCTTGCTTAAATCAGAATATCCAAAGTACACTCCATTACTTGCAACGATTTTGGAAGGTTTAGTTTCTTGGAGTAATATCAAAGACAAAATCCATCATGATGAAGAGGTGGTTGGTGCAGCCAGTGAGGTGATTAACAGTATTGACAGAGAAGAGCTAGCAAAATTTTTTGCTCTAAAAAATGATCCAGAAGATGAGGAAGCGGAGAATATCAGGAAAGAGATGGAGTTAACCCGAGACCAATTGGCAGATGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGACGTAGATAAGTCCCCGACTTTGGCTGCCACAGAAGGGGCAAAAGAAGACATAGAAAATAAAAAATCTACGGATGGTCGCAGTCAAGGAGATTTGTTTGAAGAGAATTTTAAAGAACTGAAGAAATGGGTTAATGTGAAGTCAACTAAATATGGGATCCTTTTAGTAACTCGTGAGAGGCGAGCTCAAAGGCTTGGGACTGCGTTGAAGGTACTGTGTGACATAATTCAAGATGACGCAGAGCCTGCCAAGAAGAAATTCTATGACCTTAAGCTCTCTTTGCTTGATGAGATTGGATGGACACATTTGGCTGCATATGAGAGACAATGGATGCATGTGCGTTTCCCTCCAAGCTTACCTCTTTTCTAG 4011 0.4159 MPCSSLTSTGDNSSSSSSNKKKDGSSLREFKLNESTFLASLMPKKEIGVDRFFDAHPEYDGRGALIAIFDSGVDPAADGLQITSDGKPKVLDVIDCTGSGDIDTSKVVKADSDGRICGASGASLVINTSWKNPSGEWHVGYKLVYELFTEGVISRLKKERKKKWDEKNQEEIARAVKQLADFDQQQIKVEDVKLKMFREDLQNRLDILRRQSESYDDKGPVIDAVVWHDGEVWRAALDTQSLEDDPNCGKLANFMPLTNYRKERKYGIFSKLDACTFVVNVFSDGNVLSIVTDCSAHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLIRALIAAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALLISAMKAEGITVSPYSVRKALENTAIPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNVPCVWYQIKIQQCGKTSPSSRGIYLREASACQQSTEWTVQVNPNFHEDADNFKDLVPFEECIELHSTEETVVKAPDYLLLTYNGRTFNVVVDPSNLSDGLHYFEVYGIDCKAPWRGPLFRIPITITKPKAITNQPPQISFSKMLFQPGHIERRYIEVPHGASWAEVTMKTSGFDTARRFYVDAVQLCPLRRPLKWESSVNFPSPAAKSFAFRVVSGQTLELVISQFWSSGIGSHETASVDFEVVFHGIKVNQEEVLLDGSDAPVRIDAETLLASEELAPVAILNKIRVPYRPIDSKIIALTADRDKLPSGKQILALTLTYKIKLEDGAQIKPHIPLLNDRIYDTKFESQFYMISDSNKRVYSSGDVYPSSSNLPKGEYILQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGSLMGNGSFKSSSLVPGIKEGIYLGPPPKEKLPKNSPQGSVLLGAISYGKLSFVGQGENKSPEKHPASYQISYIVPPNKIDEDKGKGSSLSSKKNVSERLKEEVRDAKIKVLASLKQETDEERLEWKELSALLKSEYPKYTPLLATILEGLVSWSNIKDKIHHDEEVVGAASEVINSIDREELAKFFALKNDPEDEEAENIRKEMELTRDQLADALYQKGLALAEIESLKLADLTWCILSKDVDKSPTLAATEGAKEDIENKKSTDGRSQGDLFEENFKELKKWVNVKSTKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYDLKLSLLDEIGWTHLAAYERQWMHVRFPPSLPLF 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01572 1336 Coils Coil 198 218 - -
Gma16g01572 1336 Coils Coil 1063 1083 - -
Gma16g01572 1336 Gene3D - 159 217 - -
Gma16g01572 1336 Gene3D - 558 691 - -
Gma16g01572 1336 PANTHER PEPTIDASE S8 13 1220 - -
Gma16g01572 1336 Gene3D - 1067 1336 - -
Gma16g01572 1336 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 41 523 IPR034051 GO:0006508|GO:0008240
Gma16g01572 1336 ProSitePatterns Serine proteases, subtilase family, serine active site. 481 491 IPR023828 -
Gma16g01572 1336 Pfam Tripeptidyl peptidase II 824 1008 IPR022229 -
Gma16g01572 1336 Gene3D Peptidase S8/S53 domain 220 555 IPR036852 GO:0004252|GO:0006508
Gma16g01572 1336 Gene3D Peptidase S8/S53 domain 44 137 IPR036852 GO:0004252|GO:0006508
Gma16g01572 1336 MobiDBLite consensus disorder prediction 1 26 - -
Gma16g01572 1336 MobiDBLite consensus disorder prediction 1 21 - -
Gma16g01572 1336 PRINTS Subtilisin serine protease family (S8) signature 293 306 IPR015500 -
Gma16g01572 1336 PRINTS Subtilisin serine protease family (S8) signature 480 496 IPR015500 -
Gma16g01572 1336 PRINTS Subtilisin serine protease family (S8) signature 61 80 IPR015500 -
Gma16g01572 1336 SUPERFAMILY Subtilisin-like 41 554 IPR036852 GO:0004252|GO:0006508
Gma16g01572 1336 Pfam Subtilase family 61 524 IPR000209 GO:0006508|GO:0008236
Gma16g01572 1336 ProSiteProfiles Serine proteases, subtilase domain profile. 46 544 - -
Gma16g01572 1336 PANTHER TRIPEPTIDYL PEPTIDASE II 13 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01572 Gma-Chr16 36136266 36156384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01572 K01280 - gmx:100798235 2577.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01572 16 36136266 36156384 Gma09g01313 09 35511831 35513275 GST
Gma16g01572 16 36136266 36156384 Gma10g02225 10 49799790 49819502 PCT
Gma16g01572 16 36136266 36156384 Gma20g01495 20 42068485 42070632 PCT
Gma10g02225 10 49799790 49819502 Gma16g01572 16 36136266 36156384 PCT
Gma20g01495 20 42068485 42070632 Gma16g01572 16 36136266 36156384 PCT