Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01570 ATGGGAACATCGGTGCAGGTAACGCCACTGTGTGGAGTGTACAATGAGAACCCTCTCTCGTATTTGGTTTCCATTGATGGCTTCAACTTCCTCGTCGACTGTGGCTGGAACGACCACTTCGACCCTTCCCTCCTTCAACCCCTCGCCAGGGTAGCATCAACCATAGATGCTGTTTTGCTTTCACATGCGGATACACTTCATCTTGGTGCCCTTCCATATGCCATGAAGCAGCTTGGACTCTCTGCCCCGGTTTATTCAACGGAGCCTGTCTACAGATTGGGCCTCCTCACTATGTATGACCAGTACCTCTCAAGAAAGCAAGTGTCGGAGTTCGATCTGTTCACGCTGGATGATATTGATTCTTCTTTCCAGAGTGTAACGAGGCTAACATATTCTCAGAATCATCATTTCTCAGGCAAGGGAGAAGGAATCGTGATTGCACCTCATGTTGCTGGACATCTTTTGGGAGGTACTATTTGGAAAATTACAAAGGATGGCGAGGATGTCATATATGCTGTTGATTTTAATCATAGGAAAGAAAGGCATTTGAATGGAACTGTTCTAGGTTCTTTTGTGCGTCCAGCTGTTCTAATAACTGATGCTTACAATGCTTTGAACAATCAGCCTTACAGACGTCAAAATGACAAAGAATTTGGAGATATCTTAAAGAAGACTCTAAGGGAAGGTGGCAATGTATTATTACCTGTTGACACTGTTGGACGAGTGTTGGAACTTATTCTGATGTTGGAATCGTATTGGACTGATGAAAACTTGAACTATCCTATATACTTTCTTACATATGTTGCATCCAGCACAATTGATTATGTGAAGAGTTTCCTTGAGTGGATGAGTGATACCATAGCAAAGTCTTTCGAAAAAACTCGTGAAAATATATTTCTTTTGAAGTATGTCACCCTTCTTATTAACAAGACTGAGCTTGACAATGCTCCAGATGGTCCAAAGGTTGTTCTAGCATCTATGGCAAGTTTGGAAGCAGGCTTTTCTCATGAGATATTTGTTGAGTGGGCCAATGATGTAAAAAATCTTGTCCTTTTTACTGAAAGAGGCCAGTTTGCCACACTAGCTCGTATGCTTCAAGCTGATCCACCTCCAAAAGCTGTCAAAGTCGTTGTGTCCAAGCGTGTTGCTTTGGTTGGTGAAGAGCTAATAGCCTATGAAGAAGAGCAAAATCGAATAAAAAAAGAAGCTTTAAAAGCTAGTCTTATGAAGGAGGAAGAACTTAAAACATCTCATGGGGCTGATAATAATACTAGTGATTCAATGGTCATTGATTCTGGCAATAATCATGTACCACCTGAAGTGTCTGGTCCCAGAGGCGGAGGATACCGGGACATATTTATTGATGGATTTGTTCCCCCTTTGACAAGTGTTGCTCCAATGTTTCCCTGTTATGAGAATACATCAGAGTGGGATGATTTTGGAGAGGTCATAAATCCAGATGATTATGTAATTAAGGATGAAGACATGGACCAGACAGCAATGCATGGAGGTGATATAAATGGAAAACTAGATGAAGGTGCTGCAAGTTTGATACTCGATACAAAGCCATCAAAAGTTGTATCTGACGAAAGGACTGTGCAAGTCAGGTGCTCATTGGTTTACATGGATTTTGAAGGACGTTCAGATGGAAGATCCATTAAAAATATTCTATCTCATGTGGCTCCCTTGAAGCTGGTTTTGGTGCATGGATCAGCTGAAGCTACAGAGCATCTGAAGCAGCACTGCCTGAAGCATGTTTGTCCACATGTTTATGCTCCCCAATTGGAAGAGACAATTGATGTCACCTCTGATTTATGTGCTTACAAGGTACAATGTTGTCAAATTTCATACATTTCTGAAAAGGCTTTGCAAGATGTCAAAATTAATCATCTAGGAGATTATGAATTAGCTTGGGTTGATGCTGTAGTAGGGAAGACAGAAAATGACCCGCTTTCGCTGCTCCCTGTTTCTGGAGCCGCTCCTCCGCATAAATCTGTTCTTGTTGGTGATTTGAAATTGGCGGATATCAAACAGTTTCTCTCCAGCAAGGGTGTTCAGGTGGAATTTGCTGGTGGGGCTTTGCGTTGTGGTGAATATGTAACTCTACGGAAAGTTGGGGATGCAAGTCAGAAGGGTGGTGGTTCTGGTGCTCAACAAATAGTTATTGAGGGTCCTCTGTGTGAAGATTACTATAAAATTCGTGACTATCTGTATTCGCAGTTTTATTTGCTTTAG 2235 0.4188 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSLLQPLARVASTIDAVLLSHADTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSSFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLREGGNVLLPVDTVGRVLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFLLKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWANDVKNLVLFTERGQFATLARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGADNNTSDSMVIDSGNNHVPPEVSGPRGGGYRDIFIDGFVPPLTSVAPMFPCYENTSEWDDFGEVINPDDYVIKDEDMDQTAMHGGDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQLEETIDVTSDLCAYKVQCCQISYISEKALQDVKINHLGDYELAWVDAVVGKTENDPLSLLPVSGAAPPHKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEGPLCEDYYKIRDYLYSQFYLL 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01570 744 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 532 583 IPR011108 -
Gma16g01570 744 Pfam Metallo-beta-lactamase superfamily domain 22 188 IPR001279 -
Gma16g01570 744 MobiDBLite consensus disorder prediction 412 444 - -
Gma16g01570 744 Gene3D - 7 260 IPR036866 -
Gma16g01570 744 SMART Beta_Casp_2 242 365 IPR022712 -
Gma16g01570 744 Pfam Cleavage and polyadenylation factor 2 C-terminal 655 741 IPR025069 -
Gma16g01570 744 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 1 743 IPR027075 GO:0005847|GO:0006378|GO:0006379
Gma16g01570 744 Pfam Beta-Casp domain 242 365 IPR022712 -
Gma16g01570 744 Coils Coil 392 412 - -
Gma16g01570 744 SUPERFAMILY Metallo-hydrolase/oxidoreductase 5 601 IPR036866 -
Gma16g01570 744 CDD CPSF2-like_MBL-fold 8 203 IPR035639 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01570 Gma-Chr16 36116276 36127923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01570 K14402 - gmx:100796817 1426.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01570 16 36116276 36127923 Gma16g01570 16 36116276 36127923 ECH
Gma16g01570 16 36116276 36127923 Gma09g01308 09 35390071 35409694 GST