Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01567 ATGGCTTCTATCTCCCTTCTTCTCGCCCTGTTCGTGTTCTTCCTAATTGCCACTTCTCTTACCGAAAGCAGTAGGAAGGAATTAAGGAACAAGCAGGAAACTGCATTACAGATGTTAGAGCGCTCAATTCATTTTTCCAACAGAATTAATCCATCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTTTTTCTATACAAAGGGTTTTTGTCGGACAAGGAGTGTGACTACCTTGTTTCTTTGGCATATGCTGTGAAAGAAAAATCCTCAGGGAATGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAAGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGGCTTTCCTTCCTAAAGAGTACAGCAAGCCTTTGCAGGTCATGCATTATGGGCCTGAGCAGAATGGTCGGAACTTAGATTATTTTACAAACAAAACCCAATTAGAATTAAGTGGACCTTTAATGGCAACAATTATTTTATATCTCTCAAATGATGTTACTCAAGGGGGTCAAATTCTTTTTCCTGAATCAGTGCCTGGGAGTAGCAGCTGGTCAAGTTGTAGTAATAGCAGCAATATTCTCCAACCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCAAGTGCTTCTCCTGACAAGAGTAGCTTCCATGCTAGATGCCCTGTCCTTGAGGGTGATATGTGGTCTGCAATTAAATACTTCTATGCAAAACCAATTAGTAGAGGTAAAGTCTCAGCCACATTAGATGGTGGTGAATGCACTGATGAAGATGACAGTTGTCCCGCTTGGGCAGCCGTGGGAGAATGTCAACGAAACCCTGTGTTCATGATTGGATCTCCTGATTATTATGGTACATGTAGGAAAAGTTGTAATGCATGCTGA 906 0.4172 MASISLLLALFVFFLIATSLTESSRKELRNKQETALQMLERSIHFSNRINPSRVVQISWQPRVFLYKGFLSDKECDYLVSLAYAVKEKSSGNGGLSEGVETSLDMEDDILARIEERLSVWAFLPKEYSKPLQVMHYGPEQNGRNLDYFTNKTQLELSGPLMATIILYLSNDVTQGGQILFPESVPGSSSWSSCSNSSNILQPVKGNAILFFSLHPSASPDKSSFHARCPVLEGDMWSAIKYFYAKPISRGKVSATLDGGECTDEDDSCPAWAAVGECQRNPVFMIGSPDYYGTCRKSCNAC 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01567 301 SMART ShkT_1 260 301 IPR003582 -
Gma16g01567 301 Pfam 2OG-Fe(II) oxygenase superfamily 131 243 IPR044862 -
Gma16g01567 301 SMART p4hc 61 243 IPR006620 GO:0005506|GO:0016705|GO:0031418
Gma16g01567 301 ProSiteProfiles ShKT domain profile. 261 301 IPR003582 -
Gma16g01567 301 Gene3D q2cbj1_9rhob like domain 53 243 - -
Gma16g01567 301 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 1 301 - -
Gma16g01567 301 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 1 301 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01567 Gma-Chr16 36093660 36097277 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01567 K00472 - gmx:100795761 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01567 16 36093660 36097277 Gma16g01567 16 36093660 36097277 ECH
Gma16g01567 16 36093660 36097277 Gma09g01305 09 35363284 35367256 GST