Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01563 ATGTCTGATGCTGCTATGGCAGTTGTGAAACCTGAGATGAAATCCTACATCTGGCTTCAAACTGTGGATGGTTCTATTCAGCAAGTAGAGGAAGAGGTAGCCATGTTTTGCCCCATGATATGCCAGGAAGTACTTCAAACAGGCATGGGATCTTCCAAAAACTATGCTATATCTCTTCCACAACGTGTCAATCCTGCAATCTTGGGATTGATACTTGACTACTGTCGGTTTCACCAAGTACCAGGACATTCTAACAAGGAGCGCAAAACTTTTGATGAGAAGTTTATTCGGATGGATACAAAGAAGTTATGTGAGTTGACATCTGCTGCCGACAGCCTCCAACTGAAGCCTTTGGTTGACCTGACCAGCCGAGCACTTGCTCGGATTATAGAAGGAAAAACTCCTGAGGAGATTCGTGAAACATTTCATTTGCCTGATGATCTCACTGAGGAGGAGAAGCTGGAGCCTCTGAGAAACATAACTGATGATCCACGAATTCGACTTCTAAACAGATTATATGCTAGAAAGAGGAAAGAACTAAAAGAGAGGAAGAAACTGAAGGATGTTGAGGTTGAGGAGGAACCAAAAGATGAGCGTTCAGTTGAAGATCTTCTATCATTTATTAATGGTGCAGATGGAGATATGAAGGGAACTAGAACAAATAAAAATAAAAAGAAGAATAGGAGAAGGAAAGACCATGCAAAGGATCTTTCTTCAAAAAATGAAAATGAAAATGATAAGGACTTGAATCCTCTCCCTTCTGCATATCACAATGTCTATTTTGACAATGCCTTGGAGGCCTCTGCAAGTAAACACTCAAGGATGCAAAACCTTCCTGCTATTAGTTTTTCTCCAAAATTTGAATTTATTGATGGAGATGTTGACGATGATTTAGATCCTGCAATGAAAGAGGAGCTTGACAGGGAAGTGGAAGATTTTGCACGAAGGTTAAATTCTGATTGGCCTGAAAGGATGCAAATTTTATCTTTGGGCCAAGACAGAAGACTAGTACCAATTTCTATAAATAGCAATGGTTCAACGCACCTGTATACAGGTTTTGATAAAAGGTAG 1071 0.4015 MSDAAMAVVKPEMKSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGMGSSKNYAISLPQRVNPAILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKERKKLKDVEVEEEPKDERSVEDLLSFINGADGDMKGTRTNKNKKKNRRRKDHAKDLSSKNENENDKDLNPLPSAYHNVYFDNALEASASKHSRMQNLPAISFSPKFEFIDGDVDDDLDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLVPISINSNGSTHLYTGFDKR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01563 356 PANTHER OS03G0107000 PROTEIN 1 263 - -
Gma16g01563 356 SUPERFAMILY POZ domain 15 79 IPR011333 -
Gma16g01563 356 MobiDBLite consensus disorder prediction 200 252 - -
Gma16g01563 356 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Gma16g01563 356 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
Gma16g01563 356 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Gma16g01563 356 Pfam Skp1 family, tetramerisation domain 17 79 IPR016073 GO:0006511
Gma16g01563 356 PANTHER SKP1 1 263 IPR016897 GO:0006511
Gma16g01563 356 SMART skp1_3 14 115 IPR001232 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01563 Gma-Chr16 36054022 36061365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01563 - - gmx:100808004 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01563 16 36054022 36061365 Gma16g01563 16 36054022 36061365 ECH
Gma16g01563 16 36054022 36061365 Gma09g01300 09 35312284 35319535 GST