Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01543 ATGTCCTCTCTCCACCTTCTTCCCGGCGCCACCACCGCCCCCAACTCCGCATTCCTCCTCCGCCCCCATTCTCCCCTCTTCCCCTCCAAAACCCTAACCCCCAAAAAACCCAAACCTCCCTCCGCCCTCCTCCAGTGGAATCGCAAGCCCGAGCTCTCCGGCTCCACCCCCCGCGTCGCCGTCATCACCTCCGGCAAGGGTGGCGTGGGCAAGACCACCACCACCGCCAACATCGGCCTCTCCCTCGCCCGTCTCGGCTTCTCCGTGGTCGCCATCGACGCCGACGTCGGCCTCCGCAACCTCGACCTCCTCCTCGGCCTCGAGAACCGCGTCAACTACACCGTGATCGAGGTCCTGAATGGCGAATGCCGCCTCGACCAAGCCCTCGTCCGCGACAAGCGCTGGTCCAACTTCGAACTCCTCTGCATCTCCAAACCCCGATCCAAACTCCCCCTCGGATTCGGCGGCAAGGCCCTCACCTGGCTCGTGGACGCGCTGAAAGCACGTTCACAGGGCTGCCCCGACTTCATCCTCATCGACTGCCCCGCCGGCATTGACGCCGGCTTCATCACCGCCATCACGCCCGCCAACGAGGCCGTCCTCATCACTACCCCCGACATCACCAGCCTCCGCGACGCCGACCGCGTCACCGGCCTCCTCGAATGCGACGGAATTCGGGACATCAAGATGATCGTCAACCGGGTTCGGACCGACATGATCAAAGGGGAGGACATGATGTCGGTGTTGGACGTGCAAGAGATGTTAGGGTTGCCTTTGCTCGGGGTTATTCCTGAGGATAGTGAGGTTATTAGAAGCACCAATAGAGGTTTCCCTCTTGTGCTCAACAAGCCTCCCACTTTGGCCGGATTGGCGTTCGAACAAGCCGCGTGGAGGCTCGTGGAGCAAGATAGCATGCAGGCCGTGGTGGTGGAAGAACAACCCAAACGTGGGTTTTTCTCCTTTTTTGGTGGGTAG 975 0.6164 MSSLHLLPGATTAPNSAFLLRPHSPLFPSKTLTPKKPKPPSALLQWNRKPELSGSTPRVAVITSGKGGVGKTTTTANIGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVIEVLNGECRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALTWLVDALKARSQGCPDFILIDCPAGIDAGFITAITPANEAVLITTPDITSLRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMMSVLDVQEMLGLPLLGVIPEDSEVIRSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQDSMQAVVVEEQPKRGFFSFFGG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01543 324 CDD MinD 58 299 - -
Gma16g01543 324 Gene3D - 57 312 IPR027417 -
Gma16g01543 324 Pfam CobQ/CobB/MinD/ParA nucleotide binding domain 61 277 IPR002586 -
Gma16g01543 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 302 IPR027417 -
Gma16g01543 324 PANTHER SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED 34 323 - -
Gma16g01543 324 PANTHER SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED 34 323 - -
Gma16g01543 324 TIGRFAM minD_bact: septum site-determining protein MinD 58 319 IPR010223 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01543 Gma-Chr16 35786280 35787254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01543 K03609 - gmx:100803741 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01543 16 35786280 35787254 Gma16g01543 16 35786280 35787254 ECH