Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01533 ATGAGTTCATATTTTGAGGAAAGGGCACCTTGTTGTGGAAGTCACTTTTGGATTTTACTAAGCATGTGTTGGGCATCTGTGTTATTTGCTGCTATCACATCAGGTCTTGCTCTAGGACTCTTGTCCTTCAGCCAGGTTGATCTTGAGGTTTTTGTTAAAGCTGGGCAGCCAAAAATCCAGAAGAATGCAGCGAAGATTATGTCCATTGCAAAGAATGAGCATTTACTTTTATGCACCCTCCTCATAGCTAAATCAATGGCACTGGAGGGGGTTTCTGTTTTTATGGAGAAAATGTTCCCAGAATGGCTTTCAGTATTATTAGCAGCCACCATTTTGGCTACCATTGCAGAGATTATCCCTCTAGCCTTGTGTTCTCGATATGGTTTAAGTGTTGGGGCAACATTGTCTCCCTTTGTTCGAGTTCTTATGATGGTTTTCTTCCCAATTGCATATCCACTTAGTAAGTTGTTGGATTGGATTTTTGGCAAGGGGCATACTGCTCTTTTAGGACGAGCAGAGCTGAAGACTTTAGTCCATTTACATGCTAATGAGGCAGGGAAAGGTGGAGAGTTGTCACTTCATGAAACTACAATAATTGCTGGAGCTTTGGACTTGACACAGAAGACTGCTAAAGATGCTATGACACCGATAAGTGAAACATTTTCTCTTGACATAAACTCCAAACTGGACATGCATACAATGGGCTTAATAATGAGCAAAGGTCACAGCCGAATACCAGTCTACTCTGGAAAACAGACAAATGTTGTTGGTATTATCTTGGTCAAGAATTTAATCTTCTGTCATCCTGAAGATGAAACACCAATTAAATATATGACTATCAGGAGAGTTCCCAGAGTTGGTGAAGATTGGCCACTATATGATATCTTGAATCAATTCAAGAATGGTCAAAGCCACATGGCTGTTGTCCTCAAGTGTGGAGAGAACATCAGAACTGTAGCAACTCATACCGAAAGCAAAACTCCAGGACATTGCTCTTCAGTTGAACTGGGAGATTATATTCGCATCTCAACCGATGCATCCAATTGGCATTCACAAGAAACAGAATATTATAGTGCAACACTGAAGAGCATCATGCATCGCGAGGGTGACTCAGATCTTCTGCAAAGAAGATCAGAACAACCTGATGCAAGTTCATCCTTTGAGAATTTGGAGTCTCTTCCAACAGCGGATGAGGAAGTGATTGGGATAATCACATTGGAAGATGTTATGGAAGAGTTACTTCAGGAAGATATATTGGATGAAACTGATCAATATGTTGATGTCCATCAAAATATCAGAATCAAACTGCAACATGCAAGAAGAGGGTCATCAGGGTCCTCCACAAGGGTTTCAAGCTCTCGTCAAAAACGGAGAAGTTCAGATGCATCTCGAGTTTGCTTTTTAACTCCTACATATGTTTCACCCGTTTCTCCTTAA 1437 0.4092 MSSYFEERAPCCGSHFWILLSMCWASVLFAAITSGLALGLLSFSQVDLEVFVKAGQPKIQKNAAKIMSIAKNEHLLLCTLLIAKSMALEGVSVFMEKMFPEWLSVLLAATILATIAEIIPLALCSRYGLSVGATLSPFVRVLMMVFFPIAYPLSKLLDWIFGKGHTALLGRAELKTLVHLHANEAGKGGELSLHETTIIAGALDLTQKTAKDAMTPISETFSLDINSKLDMHTMGLIMSKGHSRIPVYSGKQTNVVGIILVKNLIFCHPEDETPIKYMTIRRVPRVGEDWPLYDILNQFKNGQSHMAVVLKCGENIRTVATHTESKTPGHCSSVELGDYIRISTDASNWHSQETEYYSATLKSIMHREGDSDLLQRRSEQPDASSSFENLESLPTADEEVIGIITLEDVMEELLQEDILDETDQYVDVHQNIRIKLQHARRGSSGSSTRVSSSRQKRRSSDASRVCFLTPTYVSPVSP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01533 478 MobiDBLite consensus disorder prediction 437 462 - -
Gma16g01533 478 Gene3D - 195 330 IPR046342 -
Gma16g01533 478 PANTHER CBS DOMAIN PROTEIN 6 478 - -
Gma16g01533 478 CDD CBS_pair_CorC_HlyC_assoc 209 310 IPR044751 -
Gma16g01533 478 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 6 478 IPR045095 GO:0010960
Gma16g01533 478 MobiDBLite consensus disorder prediction 372 391 - -
Gma16g01533 478 SUPERFAMILY CBS-domain pair 198 415 IPR046342 -
Gma16g01533 478 Pfam Cyclin M transmembrane N-terminal domain 26 184 IPR002550 -
Gma16g01533 478 ProSiteProfiles CNNM transmembrane domain profile. 12 195 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01533 Gma-Chr16 35664725 35669018 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01533 K16302 - gmx:100798424 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01533 16 35664725 35669018 Gma16g01533 16 35664725 35669018 ECH
Gma16g01533 16 35664725 35669018 Gma09g01235 09 33947367 33951534 GST