Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01531 ATGCTTGCGCTGACAGATTCTCCTCTACTTATTGCTAAAACATTTGAAGCAATTAAAATACCAACAAGTACACGAGGCACTGTGTTATGTGCTGCAAAAGGTCAAAGACCAAGATATCCCCGAGTTTGGAAGACCCATAAAAAAATTGGGACCATTTCCAAGGCTGCCAAGCTTGTTAACTCTATTAAGGAGCTGTCAAATGTCAAAGAGGAAGTTTATGGAGCTCTTGATTCCTATGTTGCTTGGGAATTAGAGTTCCCTTTAATTACAGTGAAAAAGGCTCTCAAGACCCTAGAATCCGAACAAGAATGGAAGCGGGTAATACAGGTAACAAAGTGGATGCTAAGCAAAGGTCAAGGGAAGACAATGGGAAGCTATTTCACATTACTTAATGCTTTAGTAGAGGATGACCGTCTTGATGAAGCTGAAGAGCTTTGGACGAAGTTATTAATGCAGTACATGGAAAGCTTGCCTCGTAGATTTTTTGATAAAATGATATCTATCTACCATAAGAGGGGCATGCATGAGAAGATGTTTGAGATATTTGCCGACATGGAGGAGCTTTGTCTTCGACCTAATATTGCTGTTGTCTCGATGATTGGGGATGCCTTCAAAGAGCTGGGTATGCTAGACAAATACCAGAAGTTACATGCAAAATATCCACCACCACAATGGGAATACAGATACATCAGAGGAAAGCGTGTAAAAGTCAAAGTGGAAGTTCAGTCTAATCAGGTCAACACATACATAGAAAGGCATGGGAATGTTGAACCAAACTCAGACTtaaacaagaattatagattatctgaaaagacttcagagatagtcgatcaacaactcagacaggatgcgaatgtaatatccatgaaacctgaacaaatttcaggcataaacaacaattatagatctgaagagacttcagacatgattgatgatcagcaacttggacaggaagcagatgtaatatccatggaacttgaacaaatttcagATGATTCATATGACAGTATGGAACCTATTTTCAATGTATAA 1032 0.3188 MLALTDSPLLIAKTFEAIKIPTSTRGTVLCAAKGQRPRYPRVWKTHKKIGTISKAAKLVNSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESEQEWKRVIQVTKWMLSKGQGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFEIFADMEELCLRPNIAVVSMIGDAFKELGMLDKYQKLHAKYPPPQWEYRYIRGKRVKVKVEVQSNQVNTYIERHGNVEPNSDLNKNYRLSEKTSEIVDQQLRQDANVISMKPEQISGINNNYRSEETSDMIDDQQLGQEADVISMELEQISDDSYDSMEPIFNV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01531 343 Pfam PPR repeat 165 188 IPR002885 -
Gma16g01531 343 Gene3D Tetratricopeptide repeat domain 44 307 IPR011990 GO:0005515
Gma16g01531 343 PANTHER OS01G0757700 PROTEIN 4 283 - -
Gma16g01531 343 TIGRFAM PPR: pentatricopeptide repeat domain 163 193 IPR002885 -
Gma16g01531 343 PANTHER OS01G0757700 PROTEIN 4 283 IPR044646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01531 Gma-Chr16 35651850 35655027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01531 - - gmx:100781797 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01531 16 35651850 35655027 Gma16g01531 16 35651850 35655027 ECH
Gma16g01531 16 35651850 35655027 Gma09g01232 09 33917468 33920487 GST