Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01530 ATGAGTTCAACTCAATCCAAACCTTCATCCGTCAATGCCCGTGGCATGGCTCTGCCGTCCGAGCCTCACCGCCGTCGCCGCCACAACCACAACCACATCTCCACCTTCCTCCAATCCACCGCCTCCAACTTCGCCTCTCTCTTCAACCCCCCAAACCCTCCCTCCCTGACTCTCCCGCACCCGCCCACCTCCGTCTCCCTCCCTCTCTTCTTcGCGCCTCCGCTCTCCGGTTCCTCCACCGTGGACTCAGCCACTTCCAAGCCCGCCCATCCCCCAGCAAAGTCAGTCCGCATCGCGCGGCTTGGTGCCAATGGAAAAGGCGGCGGCGGGCCAGTCTTCTTGGGGGAGGTGTTCAGCTTGTGCGACCTCTCCGGAACGGGGCTCATTGCCGCTTCCAAGCACTTCGGCATTCCCTTCATTTCGGAAAGAACCCCTGAGTGGCTGAAAAAAATATTTGCACCGATCACCAAGAGTGAGAGGAATGGTCCTGTATTTCGCTTTTTTATTGATCTAGAAGATGCAGTTTCATATGTTGAAAAGCTGAATATTCCAAGTTGCGTGGTGGGTGCCTTTCGTCTTGATCTAGCATATAAACAATTCAAGGAAAAACCTCACTTGTTCCAGTTTGTTCCAAATGAGAAGCAGGTCAAGGCAGCCAATAAACTGCTGAAGACAATATCAGAGCATGGTGACAAGAAAAAGGTTGATGGGGTGCCTGTGTTTGGTGCCCAGAACTTAGATATTGCAATAGCAACTACAGATGGTATTAAATGGTACACTCCCTACTTCTTTGATAAAAACATGCTTGATAATATTCTTGAAGATGCTGTTGATCAACATTTCCATAACTTAATCCAAACTCGACACATGCAGCGGCGGCGGGATGTGGTTGATGACAACTTAGCTGCAGAAGTGATTGAGGAAATGAGCGATAGGTTAGGGGAGCCTCCAGAGGTTCAGGAATTGCTAGACGAAATGGGCCACCCTAGTATACCATTAAGTGTTATTTCAAAAGCTGCAGGGCTTCAGTTTCAGTATACTGTCGACAAAGTATTACTGGGTAATAGGTGGTTGCGGAAAGCAACAGGCATACAACCAAAATTTCCATATATGGTTGACTCATTTGAGAGAAGAAGTGAAGCTTCTCTTCTGAGAGCTACAGAGTCAAGCAGCTGCCTTGAGAACTCTAAAGTGGAAGATGATAGGCAAATTTCTGAATGCTTAGACTCTTCTAATTGCAGTTTGGATGGTAATACTGAAGCAATCAAACAACCTAGTCCAAGCTTAAGTCTACCATTTGGTAATTGGTTTCATCACCTATGGCCGAAACAGTGTCGTGAAAAAGCAAGCTCATCTAGAAAAGGTGTAAATAAGGAAGAAATGAAACCAAGACCCATTCTTCCAAAAGTTACAATGGTTGGTCTCTCTACAGAAGAAGCAGGCCAAACGAGCAAAGCTAATTTAAAGAAGACAATGGACGATTTGACAAGAGAGTTGGAGAAGACAGAACTAGATATTATGACAGATGGTGGCAGTAAAGAGTGCAAAGTAGAAGATAGGGATCCACTATTTGTGGCAAATGGGGGAAATTACTATTCTAGTATGAGGAGAAAACCAGGATCTGGTCGCTAG 1632 0.4645 MSSTQSKPSSVNARGMALPSEPHRRRRHNHNHISTFLQSTASNFASLFNPPNPPSLTLPHPPTSVSLPLFFAPPLSGSSTVDSATSKPAHPPAKSVRIARLGANGKGGGGPVFLGEVFSLCDLSGTGLIAASKHFGIPFISERTPEWLKKIFAPITKSERNGPVFRFFIDLEDAVSYVEKLNIPSCVVGAFRLDLAYKQFKEKPHLFQFVPNEKQVKAANKLLKTISEHGDKKKVDGVPVFGAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEDAVDQHFHNLIQTRHMQRRRDVVDDNLAAEVIEEMSDRLGEPPEVQELLDEMGHPSIPLSVISKAAGLQFQYTVDKVLLGNRWLRKATGIQPKFPYMVDSFERRSEASLLRATESSSCLENSKVEDDRQISECLDSSNCSLDGNTEAIKQPSPSLSLPFGNWFHHLWPKQCREKASSSRKGVNKEEMKPRPILPKVTMVGLSTEEAGQTSKANLKKTMDDLTRELEKTELDIMTDGGSKECKVEDRDPLFVANGGNYYSSMRRKPGSGR 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01530 543 MobiDBLite consensus disorder prediction 1 27 - -
Gma16g01530 543 Pfam Tic22-like family 199 277 IPR007378 GO:0015031
Gma16g01530 543 PANTHER OS01G0225300 PROTEIN 19 538 - -
Gma16g01530 543 Coils Coil 485 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01530 Gma-Chr16 35643426 35649881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01530 - - gmx:100797355 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01530 16 35643426 35649881 Gma16g01530 16 35643426 35649881 ECH
Gma16g01530 16 35643426 35649881 Gma09g01231 09 33898753 33906646 GST