Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01462 atggccaaaagaacaagtccgatttacataggattcgtgattgtattgtgtgcctcaagcatgtttgtaatttgtatgggagaatgggaatcaacttggagcacaagagctgcagaagaagctgaggctgtggcagcaataccatgctcaggacatggaagagcctacttagatggtcttattctaaaagggcatgagcctgtttgtgagtgcaatccatgttatggtggatctgattgctccaacttattatctgattgtgctgccaatgctggaagTGGAGACCCATATTTTTTGGAGCCATTTTGGATGCAACATGCAGCAAGTAGCGCGATTTTAGTATCAGGATGGCACAGAATGGGATATTCTTATAGTGATGAATCATACATCTCACAACTATTGGTTGAGTACATAAAAAAACTTCACGCCATCGTTGGGAATGCAGCCACTGAAGGCAGGTACATTGTTTTTGGAAGTGGCTCAACGCAACTCCTCAATGCTGCTGTTCATGCCTTGTCTCCCAGTTCTTCAGTGTCTCCGGCAAAAGTGGTAGCCACAGCACCATATTATCCCGTGTATAGAGCACAGACACAATTTTTCAATTCTAGAGATTTTAGTTATGAAGGAGACACGTCCTTGTGGAAAAACAGCACAGATAGCAACTCTAGATTTATTGAGTTTGTGACTTCACCAAACAATCCCGATGGAAAGTTGAACAAGGGAGTTCTCAAAGGCCCTAATGTCAAAACCATTTATGATCGAGCCTATTATTGGCCACATTTCACTGCTATTCCTTCACCAGCTGATGATGATCTAATGCTGTTTACAATTTCCAAGCTCACAGGCCATGCTGGGAGTAGATTTGGATGGGCAATAATAAAGGATGAGGCAGTATATCAAACGATGTTGACATATTTGCAATTGAACACCTTTGGAGTTTCCCGTGACGCTCAGCTGAGAGCTTTAAAGCTTTTGGACGTGGTTCTTGAAGGAGATGGAAAAGAATTATTCCAGTTTGCATATTCAACCTTGAAAGATCGTTGGAGGAGGTTGAAACAAATCATATCTGAATCAAAACGGTTTTCTCTACAGAATTTGTCTCCCCAATACTGTACCTTTTTCAAGAGGGTCAAAGATCCTTCGCCAGCATACGCTTGGTTAAAGTGTGAGAGACAACAAGACAAGAATTGCTATGAAATCCTTGAAGCTGCTGGCATCATTGGCCGTCAAGGCAGTGACTATAGTGCTGATAATCGTTACCTGCGTCTCAGTCTCATTAGGAGCGAAGATGATTTTGAGATACTAATAAACAAGCTTAAAAATCTAGTTCCAACGGAAAAGGAAACCAAGGATTTTAACAACTAG 1365 0.3282 MAKRTSPIYIGFVIVLCASSMFVICMGEWESTWSTRAAEEAEAVAAIPCSGHGRAYLDGLILKGHEPVCECNPCYGGSDCSNLLSDCAANAGSGDPYFLEPFWMQHAASSAILVSGWHRMGYSYSDESYISQLLVEYIKKLHAIVGNAATEGRYIVFGSGSTQLLNAAVHALSPSSSVSPAKVVATAPYYPVYRAQTQFFNSRDFSYEGDTSLWKNSTDSNSRFIEFVTSPNNPDGKLNKGVLKGPNVKTIYDRAYYWPHFTAIPSPADDDLMLFTISKLTGHAGSRFGWAIIKDEAVYQTMLTYLQLNTFGVSRDAQLRALKLLDVVLEGDGKELFQFAYSTLKDRWRRLKQIISESKRFSLQNLSPQYCTFFKRVKDPSPAYAWLKCERQQDKNCYEILEAAGIIGRQGSDYSADNRYLRLSLIRSEDDFEILINKLKNLVPTEKETKDFNN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01462 454 Pfam Alliinase EGF-like domain 32 87 IPR006947 GO:0016846
Gma16g01462 454 Pfam Allinase 90 443 IPR006948 GO:0016846
Gma16g01462 454 Gene3D Aspartate Aminotransferase, domain 1 334 444 IPR015422 GO:0003824
Gma16g01462 454 PANTHER TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3 13 448 - -
Gma16g01462 454 SUPERFAMILY PLP-dependent transferases 31 442 IPR015424 -
Gma16g01462 454 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 13 448 - -
Gma16g01462 454 Gene3D - 131 333 IPR015421 GO:0003824
Gma16g01462 454 CDD AAT_like 90 440 - -
Gma16g01462 454 Gene3D - 31 130 IPR037029 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01462 Gma-Chr16 33766055 33768349 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01462 - - gmx:100782711 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01462 16 33766055 33768349 Gma16g01462 16 33766055 33768349 ECH