Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01434 ATGTTCCTCAAAACCCAATTCCTGTTCCTCCTCACCCTTGTTTTAGCAACAAGCACAGTTACCACCGCCATAGACCCAGGTTCTACCCTCTCAGCTTCTTCTTCCAACCAAACGTGGTCTTCTCCCAGCGGCACCTTCTCCCTCCTATTCATCCCCGTCCAGCCACCAACCACCCCTCCCTCCTTCATCGCTGCCATCGCCTACACCGGCGGCAACCCCGTCGTCTGGTCCGCTGGAAACGGCGCCGCCGTGGACTCCGGCGGGTCCCTCCAGTTCCTCCGCTCCGGCGACCTCCGCCTCGTCAACGGCTCCGGCTCCGCCGTGTGGGACGCCGGCACGGCGGGTGCCACTTCAGCAACCCTCGAAGACAGTGGCAATTTGGTAATTTCCAACGGCACTGGCACCCTCTGGTCAAGCTTTGACCACCCCACTGATACCCTTGTGCCCTCTCAGAATTTTAGTGTTGGTAAGGTTCTCACTTCTGAAAGGTACTCTTTTAGCCTTAGTTCAATTGGGAATTTGACCCTAACATGGAACAATAGCATAGTGTACTGGAACCAGGGGAACTCTTCTGTGAATGCGAGTTCGGATTCCCCTGTGTTGGCCTTGTCTCCAATTGGGCTTTTGCAACTTTCTTATGCGAAATTGAGCACTGTTGCTCTTGTTGCCTATAGTAGTGACTATGATAAGAATGATGGAGTGTTTAGGGTGTTGAAGTTGGATAATGATGGCAATTTGAGGATTTATAGCAGTAGTCTTGGTGGTGGAACTCCTAGTGTTAGATGGACTGCTGTTTCGGATCAATGTGAGGTTTATGCCTACTGTGGGAACTATGGTGTGTGTAGTTACAACGATTCAAGCCCGGTTTGCGGTTGCCCGTCTCAGAATTTTGAGATGGTTGATCCAAATGATAGTAGGAGAGGGTGCAGGAGGAAGGTGAGTCTTGATAGTTGTCAAAGGAATGTGACTGTGTTGACGTTGGATCATACTGTGGTCTTGAGTTATCCCCCTGAGGCAGCGTCGCAGTCGTTTTTCATTGGTTTATCAGCATGTAGTACGAATTGTCTTTCGAATTCGGGTGCCTGTTTTGCTGCTACTTCCTTGTCAGATGGCTCGGGGCAGTGTGTAATAAAATCAGAAGATTTTGTTAGTGGATATCATGATCCTTCGCTGCCTAGCACTTCATATATCAAGGTTTGTCCGCCGCTAGCGCCAAATCCACCACCCTCTATAGGGGACTCTGTGAGGGAAAAGAGGTCCAGGGTGCCTGCTTGGGTTGTGGTGGTGATCATTTTGGGTACCCTTTTGGGTTTGATTGCCTTGGAAGGTGGTTTGTGGATGTGGTGTTGTAGGCACAGCACAAGGCTTGGTGTGTTGTCTGCTCAGTATGCACTTCTTGAGTATGCTTCTGGTGCACCTGTGCAGTTCTCGtacaaggagctccagcaagcgacaaaggggttcaaggagaagcttggagctggtggatttggcgctgtgtatagaggaactcttgttaacaaaacagttgttgctgtgaagcaacttgagggcattgagcaagggGTAACAGAGCCTGAAAGGCCACCTGCCCCAAAATCAGTGATGGAAGGAGCTGTTAGTGGAACCAGCACATACCTGAGTAGCAATGCCAGTGCATTCTCAGTCGGAGTTTCACCCCCTGGTCCCTCTTCTTCATCATCATTTCAGACTAGTGCTGTTTCAACCTTCACCTCAGGAAGGAACCTTGAGAAGACAACCTCATCCCTTTTACAATCAGACACATGA 1788 0.4648 MFLKTQFLFLLTLVLATSTVTTAIDPGSTLSASSSNQTWSSPSGTFSLLFIPVQPPTTPPSFIAAIAYTGGNPVVWSAGNGAAVDSGGSLQFLRSGDLRLVNGSGSAVWDAGTAGATSATLEDSGNLVISNGTGTLWSSFDHPTDTLVPSQNFSVGKVLTSERYSFSLSSIGNLTLTWNNSIVYWNQGNSSVNASSDSPVLALSPIGLLQLSYAKLSTVALVAYSSDYDKNDGVFRVLKLDNDGNLRIYSSSLGGGTPSVRWTAVSDQCEVYAYCGNYGVCSYNDSSPVCGCPSQNFEMVDPNDSRRGCRRKVSLDSCQRNVTVLTLDHTVVLSYPPEAASQSFFIGLSACSTNCLSNSGACFAATSLSDGSGQCVIKSEDFVSGYHDPSLPSTSYIKVCPPLAPNPPPSIGDSVREKRSRVPAWVVVVIILGTLLGLIALEGGLWMWCCRHSTRLGVLSAQYALLEYASGAPVQFSYKELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGVTEPERPPAPKSVMEGAVSGTSTYLSSNASAFSVGVSPPGPSSSSSFQTSAVSTFTSGRNLEKTTSSLLQSDT 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01434 595 MobiDBLite consensus disorder prediction 556 595 - -
Gma16g01434 595 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 5 523 - -
Gma16g01434 595 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 522 585 - -
Gma16g01434 595 ProSiteProfiles Bulb-type lectin domain profile. 144 261 IPR001480 -
Gma16g01434 595 Pfam PAN-like domain 333 384 IPR003609 -
Gma16g01434 595 PANTHER OS07G0415500 PROTEIN 5 523 - -
Gma16g01434 595 ProSiteProfiles PAN/Apple domain profile. 318 400 IPR003609 -
Gma16g01434 595 SUPERFAMILY Protein kinase-like (PK-like) 469 517 IPR011009 -
Gma16g01434 595 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Gma16g01434 595 SMART blect_4 30 143 IPR001480 -
Gma16g01434 595 Gene3D Phosphorylase Kinase; domain 1 462 528 - -
Gma16g01434 595 ProSiteProfiles Bulb-type lectin domain profile. 21 142 IPR001480 -
Gma16g01434 595 Pfam D-mannose binding lectin 74 164 IPR001480 -
Gma16g01434 595 PANTHER OS07G0415500 PROTEIN 522 585 - -
Gma16g01434 595 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 189 IPR036426 -
Gma16g01434 595 Gene3D - 17 141 IPR036426 -
Gma16g01434 595 Pfam S-locus glycoprotein domain 230 293 IPR000858 GO:0048544
Gma16g01434 595 Gene3D - 142 264 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01434 Gma-Chr16 33441160 33443796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01434 459 525 Receptor kinase-like Gene Family AT5G20050 40.299 1.41e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01434 - - gmx:100795819 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01434 16 33441160 33443796 Gma16g01434 16 33441160 33443796 ECH
Gma16g01434 16 33441160 33443796 Gma02g00685 02 6655912 6658737 GST