Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01300 ATGGGAGGGCAATCCAGCAAGATGTTTAGTGTTGAATCCCCAACACCAATTAAAATGGGTACTCATTCTCTGTATGCTGCTGACTTGAGCTCCTATGAAGCTGCATGTGTTAAAGATCCAAACTTGCAATCCTTTGATGTGAGCATTCAGGAGCATACCAATAGGGTGATTAGTTCCCTAGCTCATGGGGTTGAGGTTAGATCCTTATCTTTTGATTCACTGAGAGAAATGACTGATAGTCTTCTTGAGATGAACCAGGAAGTAGTCAAAGTTATTTTGGATTGCAAGAAAGATATATGGGGCAACTCAGAATTGTTCTCCTTGGTGAATGATTACTTTAATAATAGCCTCCAAACATTGGAGTTCTGTAACTCACTTGAGAAATGCTTGAGGAGGGCACGCGAAAACCAGATGATAGTCAAGTCAGTGGTTACCTACTTTGAGGAAGAGGGGCAAAATGGGGCTGACGGGGTGACTTATGTGAAGACATTGCAAGAGCTTAAGAAGTTTAAGGATGCCAGGGACCCCTTTACTGAAGAGTTTTATTTGTTGTTTCAATCAGTTTACGCGCAGCAGGCATCAATGTTGCAGAAATTGCAAATCAGGAAGAGAAAGCTCGATAAGAAATTGAAATCCCTCAAGACATGGAAGAGAGTGTCAAATGTCATTTTTGTGGCTGCTTTTGTTTCTGTGTTGATTTTCTCAGTTGTGGCGGCTTCTGTTGCGGCGCCACCGGTTGTGACAGCCTTGGCTGCTGCATTGGCTGTTCCTATAGGGTCAGTAGGAAAATGGTGCAACTCTCTCTTCAAGCGCTATGAGAAAGCTCTAAAGGGACAGCGGGAAGTGATCAGCTCAATGCAGATTGGTACTTTCATTTCATTGAAGGACTTAGACAACATTCGAGTGCTTGTCAACAAATTGGAGGGAGTTCTAGAATCATTATTGCAGAATGCTGATTTTGCCATTAAAAATGAGGATGTTATGAAGTTTGCAATCGACGAGATTAAGAAAAAAATAGAAGCATTTTCAGAGACTATGGAGAATTTAAGTACTCATGCGGATAAATGCTGTCGACAGATAAGGAGAGCAAGGACTGTGGATTGCAAAAGGAAGCACTATTCACCATCATCGGACTGTCACTCCTTCCTCCTTAAACATCACCATAGCTGCCAACACCACCATACCCACCCAGATTTGGCAAACCACTATTCACCATCACCACGCACGGCTCTAACATTTTTGGGCTTGGTGGAGGTGGATTTGGTCGTTGTAATGGTGAGGGAGATAGAGCGACGAGCAACATGGGTGTTTGGAGTGGAGGTGGTGCGTGGTGCAGAGCTGGTGGCTTGGGGTGTGCGGTTGAGGCTTAATGAGACACCACGAAGAAAGAAAACAAACTACTCTCAAATGAACAACACCTATAGCATCTACAAAAACTAG 1440 0.4347 MGGQSSKMFSVESPTPIKMGTHSLYAADLSSYEAACVKDPNLQSFDVSIQEHTNRVISSLAHGVEVRSLSFDSLREMTDSLLEMNQEVVKVILDCKKDIWGNSELFSLVNDYFNNSLQTLEFCNSLEKCLRRARENQMIVKSVVTYFEEEGQNGADGVTYVKTLQELKKFKDARDPFTEEFYLLFQSVYAQQASMLQKLQIRKRKLDKKLKSLKTWKRVSNVIFVAAFVSVLIFSVVAASVAAPPVVTALAAALAVPIGSVGKWCNSLFKRYEKALKGQREVISSMQIGTFISLKDLDNIRVLVNKLEGVLESLLQNADFAIKNEDVMKFAIDEIKKKIEAFSETMENLSTHADKCCRQIRRARTVDCKRKHYSPSSDCHSFLLKHHHSCQHHHTHPDLANHYSPSPRTALTFLGLVEVDLVVVMVREIERRATWVFGVEVVRGAELVAWGVRLRLNETPRRKKTNYSQMNNTYSIYKN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01300 479 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 370 - -
Gma16g01300 479 Coils Coil 297 324 - -
Gma16g01300 479 Coils Coil 332 352 - -
Gma16g01300 479 Pfam Protein of unknown function (DUF677) 42 366 IPR007749 -
Gma16g01300 479 PANTHER UPF0496 PROTEIN 3-RELATED 1 370 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01300 Gma-Chr16 31620634 31624013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01300 - - gmx:100786579 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00538 02 5341554 5343734 Gma16g01300 16 31620634 31624013 ECH
Gma16g01300 16 31620634 31624013 Gma16g01300 16 31620634 31624013 ECH